57 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_10516	Uncharacterized protein. (361 aa)
	PV05_01950	Uncharacterized protein. (199 aa)
	PV05_01839	Aminotran_1_2 domain-containing protein. (406 aa)
	PV05_01809	Ornithine aminotransferase. (485 aa)
	PV05_01804	Uncharacterized protein. (428 aa)
	PV05_01598	Lactamase_B domain-containing protein. (393 aa)
	PV05_01265	Sterol 24-C-methyltransferase; Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol. (385 aa)
	PV05_01093	Uncharacterized protein. (408 aa)
	PV05_00708	RNA helicase. (849 aa)
	PV05_03722	Uncharacterized protein. (683 aa)
	PV05_05177	Lactamase_B domain-containing protein. (404 aa)
	PV05_02032	Tyrosine--tRNA ligase. (610 aa)
	PV05_01744	Uncharacterized protein. (216 aa)
	PV05_01570	Uncharacterized protein. (219 aa)
	PV05_06548	UDPG_MGDP_dh_C domain-containing protein. (649 aa)
	PV05_00777	Uncharacterized protein. (385 aa)
	PV05_01115	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (565 aa)
	PV05_00140	Vacuolar protein 8. (562 aa)
	PV05_08314	Uncharacterized protein. (445 aa)
	PV05_00756	RING-type domain-containing protein. (385 aa)
	PV05_03068	Uncharacterized protein. (606 aa)
	PV05_09358	Response regulatory domain-containing protein. (618 aa)
	PV05_05333	Uncharacterized protein. (221 aa)
	PV05_05574	Protein kinase domain-containing protein. (894 aa)
	PV05_04246	Uncharacterized protein. (448 aa)
	PV05_09204	tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. (305 aa)
	PV05_06722	SAE2 domain-containing protein. (510 aa)
	PV05_07836	Uncharacterized protein. (647 aa)
	PV05_08423	Uncharacterized protein. (188 aa)
	PV05_08337	Uncharacterized protein. (400 aa)
	PV05_10530	Uncharacterized protein. (1209 aa)
	PV05_09903	Lactamase_B domain-containing protein. (184 aa)
	PV05_09818	Uncharacterized protein. (1158 aa)
	PV05_09746	Rhodanese domain-containing protein. (632 aa)
	PV05_11263	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (493 aa)
	PV05_01123	Uncharacterized protein. (939 aa)
	PV05_00945	HTH myb-type domain-containing protein. (698 aa)
	PV05_00724	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (273 aa)
	PV05_00437	Uncharacterized protein. (310 aa)
	PV05_03033	Uncharacterized protein; Belongs to the GrpE family. (267 aa)
	PV05_02892	UDPG_MGDP_dh_C domain-containing protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (391 aa)
	PV05_05866	Uncharacterized protein. (663 aa)
	PV05_05715	Uncharacterized protein. (430 aa)
	PV05_07223	EXPERA domain-containing protein. (259 aa)
	PV05_06214	Histone H2A; Belongs to the histone H2A family. (138 aa)
	PV05_08599	Uncharacterized protein. (739 aa)
	PV05_11156	Uncharacterized protein. (149 aa)
	PV05_01027	Uncharacterized protein. (356 aa)
	PV05_03866	Glucosamine-6-phosphate isomerase. (345 aa)
	PV05_03418	Flavodoxin_2 domain-containing protein. (266 aa)
	PV05_06107	Epimerase domain-containing protein. (320 aa)
	URM1	Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (105 aa)
	PV05_04180	INTRADIOL_DIOXYGENAS domain-containing protein. (137 aa)
	PV05_06837	Glucosamine-6-phosphate isomerase. (266 aa)
	PV05_09044	Uncharacterized protein. (324 aa)
	PV05_07881	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1043 aa)
	PRT1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (742 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PRT1	PV05_00708	A0A0D2BEV0	A0A0D2FK46	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	RNA helicase.	0.439
PRT1	PV05_06107	A0A0D2BEV0	A0A0D2BYT5	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Epimerase domain-containing protein.	0.403
PV05_00708	PRT1	A0A0D2FK46	A0A0D2BEV0	RNA helicase.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	0.439
PV05_00708	PV05_00724	A0A0D2FK46	A0A0D2DE23	RNA helicase.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.450
PV05_00708	PV05_11156	A0A0D2FK46	A0A0D2CI56	RNA helicase.	Uncharacterized protein.	0.403
PV05_00724	PV05_00708	A0A0D2DE23	A0A0D2FK46	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	RNA helicase.	0.450
PV05_00777	PV05_01950	A0A0D2F0X9	A0A0D2FPG5	Uncharacterized protein.	Uncharacterized protein.	0.911
PV05_00777	PV05_05866	A0A0D2F0X9	A0A0D2D4L3	Uncharacterized protein.	Uncharacterized protein.	0.941
PV05_00777	PV05_08314	A0A0D2F0X9	A0A0D2EXZ4	Uncharacterized protein.	Uncharacterized protein.	0.941
PV05_00777	PV05_09746	A0A0D2F0X9	A0A0D2E6C9	Uncharacterized protein.	Rhodanese domain-containing protein.	0.723
PV05_00777	PV05_10516	A0A0D2F0X9	A0A0D2BHR0	Uncharacterized protein.	Uncharacterized protein.	0.960
PV05_00945	PV05_06214	A0A0D2DEK6	A0A0D2CUN4	HTH myb-type domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.521
PV05_00945	PV05_09818	A0A0D2DEK6	A0A0D2E6K8	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.412
PV05_01027	PV05_01804	A0A0D2C7D1	A0A0D2FNW2	Uncharacterized protein.	Uncharacterized protein.	0.593
PV05_01027	PV05_04180	A0A0D2C7D1	A0A0D2BSI2	Uncharacterized protein.	INTRADIOL_DIOXYGENAS domain-containing protein.	0.593
PV05_01027	PV05_04246	A0A0D2C7D1	A0A0D2EJF6	Uncharacterized protein.	Uncharacterized protein.	0.593
PV05_01027	PV05_05715	A0A0D2C7D1	A0A0D2D441	Uncharacterized protein.	Uncharacterized protein.	0.593
PV05_01027	PV05_09044	A0A0D2C7D1	A0A0D2BLR3	Uncharacterized protein.	Uncharacterized protein.	0.593
PV05_01115	PV05_03033	A0A0D2EYY2	A0A0D2D8E0	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Uncharacterized protein; Belongs to the GrpE family.	0.785
PV05_01570	PV05_08423	A0A0D2F3E9	A0A0D2EBQ7	Uncharacterized protein.	Uncharacterized protein.	0.935