7 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_08303	Uncharacterized protein. (356 aa)
	PV05_00297	Uncharacterized protein. (1134 aa)
	PV05_07532	Uncharacterized protein. (411 aa)
	PV05_02668	Uncharacterized protein. (421 aa)
	PV05_00290	Uncharacterized protein. (586 aa)
	PV05_07846	Cytochrome b5 heme-binding domain-containing protein. (550 aa)
	PV05_03829	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (881 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00290	PV05_00297	A0A0D2EWC7	A0A0D2DCR6	Uncharacterized protein.	Uncharacterized protein.	0.880
PV05_00290	PV05_03829	A0A0D2EWC7	A0A0D2C3G8	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.880
PV05_00290	PV05_08303	A0A0D2EWC7	A0A0D2EBE5	Uncharacterized protein.	Uncharacterized protein.	0.791
PV05_00297	PV05_00290	A0A0D2DCR6	A0A0D2EWC7	Uncharacterized protein.	Uncharacterized protein.	0.880
PV05_00297	PV05_02668	A0A0D2DCR6	A0A0D2FDJ0	Uncharacterized protein.	Uncharacterized protein.	0.880
PV05_00297	PV05_03829	A0A0D2DCR6	A0A0D2C3G8	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.956
PV05_00297	PV05_07532	A0A0D2DCR6	A0A0D2CYL4	Uncharacterized protein.	Uncharacterized protein.	0.880
PV05_00297	PV05_07846	A0A0D2DCR6	A0A0D2EBW3	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.880
PV05_00297	PV05_08303	A0A0D2DCR6	A0A0D2EBE5	Uncharacterized protein.	Uncharacterized protein.	0.880
PV05_02668	PV05_00297	A0A0D2FDJ0	A0A0D2DCR6	Uncharacterized protein.	Uncharacterized protein.	0.880
PV05_02668	PV05_03829	A0A0D2FDJ0	A0A0D2C3G8	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.880
PV05_02668	PV05_07532	A0A0D2FDJ0	A0A0D2CYL4	Uncharacterized protein.	Uncharacterized protein.	0.782
PV05_02668	PV05_07846	A0A0D2FDJ0	A0A0D2EBW3	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.797
PV05_02668	PV05_08303	A0A0D2FDJ0	A0A0D2EBE5	Uncharacterized protein.	Uncharacterized protein.	0.804
PV05_03829	PV05_00290	A0A0D2C3G8	A0A0D2EWC7	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.880
PV05_03829	PV05_00297	A0A0D2C3G8	A0A0D2DCR6	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.956
PV05_03829	PV05_02668	A0A0D2C3G8	A0A0D2FDJ0	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.880
PV05_03829	PV05_07532	A0A0D2C3G8	A0A0D2CYL4	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.880
PV05_03829	PV05_07846	A0A0D2C3G8	A0A0D2EBW3	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Cytochrome b5 heme-binding domain-containing protein.	0.880
PV05_03829	PV05_08303	A0A0D2C3G8	A0A0D2EBE5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.880