STRINGSTRING
PV05_05392 PV05_05392 PV05_01459 PV05_01459 PV05_05312 PV05_05312 PV05_05220 PV05_05220 PV05_00278 PV05_00278 PV05_00833 PV05_00833 PV05_06696 PV05_06696 PV05_07426 PV05_07426 PV05_01512 PV05_01512 PV05_05673 PV05_05673 SPB1 SPB1 PV05_03836 PV05_03836 PV05_11384 PV05_11384 PV05_10987 PV05_10987 PV05_07131 PV05_07131 PV05_06697 PV05_06697 PV05_09052 PV05_09052 PV05_08914 PV05_08914 PV05_06186 PV05_06186 PV05_08163 PV05_08163 PV05_10023 PV05_10023 PV05_11385 PV05_11385 PV05_11212 PV05_11212 PV05_05823 PV05_05823
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV05_05392Brix domain-containing protein. (384 aa)
PV05_01459RNA helicase. (641 aa)
PV05_05312Uncharacterized protein. (185 aa)
PV05_05220Uncharacterized protein. (718 aa)
PV05_00278ATP-dependent RNA helicase DBP10. (920 aa)
PV05_00833CBF domain-containing protein. (1041 aa)
PV05_06696Uncharacterized protein. (356 aa)
PV05_07426Uncharacterized protein. (824 aa)
PV05_01512C2H2-type domain-containing protein. (116 aa)
PV05_05673AB hydrolase-1 domain-containing protein. (419 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (833 aa)
PV05_03836Ribosome biogenesis protein NSA2. (261 aa)
PV05_1138460S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
PV05_10987Uncharacterized protein. (229 aa)
PV05_07131Uncharacterized protein. (707 aa)
PV05_06697Brix domain-containing protein. (340 aa)
PV05_09052RRM domain-containing protein. (722 aa)
PV05_08914RNA helicase. (632 aa)
PV05_06186Uncharacterized protein. (284 aa)
PV05_08163TRASH domain-containing protein. (196 aa)
PV05_10023Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (229 aa)
PV05_11385Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (682 aa)
PV05_11212Uncharacterized protein; Belongs to the DEAD box helicase family. (513 aa)
PV05_05823Protein MAK16; Belongs to the MAK16 family. (322 aa)
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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