12 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_05694	Uncharacterized protein. (900 aa)
	PV05_09052	RRM domain-containing protein. (722 aa)
	PV05_00504	RIO domain-containing protein. (380 aa)
	PV05_01679	Uncharacterized protein. (697 aa)
	PV05_10277	Uncharacterized protein. (472 aa)
	PV05_09562	Uncharacterized protein. (189 aa)
	PV05_05602	Uncharacterized protein. (518 aa)
	PV05_02845	CBF domain-containing protein. (288 aa)
	PV05_11618	Uncharacterized protein. (332 aa)
	PV05_04024	DRIM domain-containing protein. (2597 aa)
	PV05_07775	Uncharacterized protein. (264 aa)
	PV05_03444	Bms1-type G domain-containing protein. (820 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00504	PV05_01679	A0A0D2FJF7	A0A0D2F3P3	RIO domain-containing protein.	Uncharacterized protein.	0.433
PV05_00504	PV05_02845	A0A0D2FJF7	A0A0D2C0R5	RIO domain-containing protein.	CBF domain-containing protein.	0.712
PV05_00504	PV05_03444	A0A0D2FJF7	A0A0D2FFT3	RIO domain-containing protein.	Bms1-type G domain-containing protein.	0.998
PV05_00504	PV05_05602	A0A0D2FJF7	A0A0D2BX72	RIO domain-containing protein.	Uncharacterized protein.	0.995
PV05_00504	PV05_05694	A0A0D2FJF7	A0A0D2EQS8	RIO domain-containing protein.	Uncharacterized protein.	0.792
PV05_00504	PV05_07775	A0A0D2FJF7	A0A0D2EBQ5	RIO domain-containing protein.	Uncharacterized protein.	0.589
PV05_00504	PV05_09052	A0A0D2FJF7	A0A0D2EFV4	RIO domain-containing protein.	RRM domain-containing protein.	0.694
PV05_00504	PV05_10277	A0A0D2FJF7	A0A0D2EUQ4	RIO domain-containing protein.	Uncharacterized protein.	0.999
PV05_01679	PV05_00504	A0A0D2F3P3	A0A0D2FJF7	Uncharacterized protein.	RIO domain-containing protein.	0.433
PV05_01679	PV05_02845	A0A0D2F3P3	A0A0D2C0R5	Uncharacterized protein.	CBF domain-containing protein.	0.590
PV05_01679	PV05_03444	A0A0D2F3P3	A0A0D2FFT3	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.833
PV05_01679	PV05_05602	A0A0D2F3P3	A0A0D2BX72	Uncharacterized protein.	Uncharacterized protein.	0.953
PV05_01679	PV05_05694	A0A0D2F3P3	A0A0D2EQS8	Uncharacterized protein.	Uncharacterized protein.	0.628
PV05_01679	PV05_07775	A0A0D2F3P3	A0A0D2EBQ5	Uncharacterized protein.	Uncharacterized protein.	0.516
PV05_01679	PV05_09052	A0A0D2F3P3	A0A0D2EFV4	Uncharacterized protein.	RRM domain-containing protein.	0.696
PV05_01679	PV05_10277	A0A0D2F3P3	A0A0D2EUQ4	Uncharacterized protein.	Uncharacterized protein.	0.412
PV05_01679	PV05_11618	A0A0D2F3P3	A0A0D2CJJ9	Uncharacterized protein.	Uncharacterized protein.	0.522
PV05_02845	PV05_00504	A0A0D2C0R5	A0A0D2FJF7	CBF domain-containing protein.	RIO domain-containing protein.	0.712
PV05_02845	PV05_01679	A0A0D2C0R5	A0A0D2F3P3	CBF domain-containing protein.	Uncharacterized protein.	0.590
PV05_02845	PV05_03444	A0A0D2C0R5	A0A0D2FFT3	CBF domain-containing protein.	Bms1-type G domain-containing protein.	0.774