127 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_10536	WD_REPEATS_REGION domain-containing protein. (338 aa)
	PV05_02045	WD_REPEATS_REGION domain-containing protein. (517 aa)
	PV05_01789	Uncharacterized protein. (616 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
	PV05_01093	Uncharacterized protein. (408 aa)
	PV05_00916	F-box domain-containing protein. (1134 aa)
	PV05_00814	WD_REPEATS_REGION domain-containing protein. (551 aa)
	PV05_00546	Uncharacterized protein. (1017 aa)
	PV05_04134	NUC153 domain-containing protein. (717 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1169 aa)
	PV05_03722	Uncharacterized protein. (683 aa)
	PV05_03619	WD_REPEATS_REGION domain-containing protein. (713 aa)
	TRM82	tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (743 aa)
	PV05_02541	Uncharacterized protein. (540 aa)
	PV05_02450	WD_REPEATS_REGION domain-containing protein. (413 aa)
	PV05_02193	Uncharacterized protein. (825 aa)
	PV05_05923	Uncharacterized protein. (613 aa)
	PV05_05900	Uncharacterized protein. (393 aa)
	PV05_04682	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (530 aa)
	PV05_04667	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (848 aa)
	PV05_07256	Uncharacterized protein. (830 aa)
	PV05_02021	WD_REPEATS_REGION domain-containing protein. (1208 aa)
	TIF34	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (336 aa)
	PV05_06685	Uncharacterized protein. (1474 aa)
	PV05_06675	WD_REPEATS_REGION domain-containing protein. (839 aa)
	PV05_01414	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1223 aa)
	PV05_01376	Uncharacterized protein. (297 aa)
	PV05_06480	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (426 aa)
	PV05_06358	Uncharacterized protein. (1307 aa)
	PV05_01085	WD_REPEATS_REGION domain-containing protein. (679 aa)
	CIA1	Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. (586 aa)
	PV05_01026	Uncharacterized protein. (1649 aa)
	PV05_00585	Guanine nucleotide-binding protein subunit beta. (353 aa)
	PV05_00572	WD_REPEATS_REGION domain-containing protein. (354 aa)
	PV05_00246	Uncharacterized protein. (685 aa)
	PV05_08291	Uncharacterized protein. (448 aa)
	PV05_07871	WD_REPEATS_REGION domain-containing protein. (532 aa)
	PV05_08059	WD_REPEATS_REGION domain-containing protein. (347 aa)
	PV05_09962	Uncharacterized protein. (589 aa)
	PV05_09435	Uncharacterized protein. (695 aa)
	PV05_10040	Vps8 domain-containing protein. (1563 aa)
	PV05_09874	WD_REPEATS_REGION domain-containing protein. (969 aa)
	PV05_09700	WD_REPEATS_REGION domain-containing protein. (571 aa)
	PV05_09302	WD_REPEATS_REGION domain-containing protein. (533 aa)
	PV05_11051	F-box domain-containing protein. (612 aa)
	PV05_11574	Uncharacterized protein. (954 aa)
	PV05_00914	CPSF_A domain-containing protein. (1188 aa)
	PV05_00790	WD_REPEATS_REGION domain-containing protein. (349 aa)
	PV05_00785	Uncharacterized protein. (398 aa)
	PV05_00701	Uncharacterized protein. (433 aa)
	PV05_03881	WD_REPEATS_REGION domain-containing protein. (546 aa)
	PV05_03550	Uncharacterized protein. (968 aa)
	PV05_02337	WD_REPEATS_REGION domain-containing protein. (889 aa)
	PV05_06015	Uncharacterized protein. (807 aa)
	PV05_07019	WD_REPEATS_REGION domain-containing protein. (611 aa)
	PV05_06721	F-box domain-containing protein. (525 aa)
	PV05_06701	Uncharacterized protein. (777 aa)
	PV05_06288	WD_REPEATS_REGION domain-containing protein. (436 aa)
	PV05_10600	Uncharacterized protein. (801 aa)
	PV05_10577	Uncharacterized protein. (2561 aa)
	PV05_09996	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (364 aa)
	PV05_12005	CNH domain-containing protein. (1020 aa)
	PV05_11651	Uncharacterized protein. (711 aa)
	PV05_11482	WD_REPEATS_REGION domain-containing protein. (517 aa)
	PV05_02002	WD_REPEATS_REGION domain-containing protein. (729 aa)
	PV05_01342	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. (1565 aa)
	PV05_01158	WD_REPEATS_REGION domain-containing protein. (1126 aa)
	PV05_00741	Uncharacterized protein. (1685 aa)
	PV05_00117	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (830 aa)
	PV05_03441	Utp12 domain-containing protein. (886 aa)
	PV05_02543	Uncharacterized protein. (624 aa)
	PV05_05403	LisH domain-containing protein. (481 aa)
	PV05_05002	WD_REPEATS_REGION domain-containing protein. (964 aa)
	PV05_07587	WD_REPEATS_REGION domain-containing protein. (1371 aa)
	PV05_07485	WD_REPEATS_REGION domain-containing protein. (1451 aa)
	PV05_07094	Pre-mRNA-splicing factor rse1. (1210 aa)
	PV05_06291	WD_REPEATS_REGION domain-containing protein. (351 aa)
	PV05_08965	Rav1p_C domain-containing protein. (1317 aa)
	PV05_08885	WD_REPEATS_REGION domain-containing protein. (509 aa)
	PV05_07881	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1043 aa)
	PV05_10566	WD_REPEATS_REGION domain-containing protein. (649 aa)
	PV05_10274	WD_REPEATS_REGION domain-containing protein. (1550 aa)
	PV05_09990	Uncharacterized protein. (983 aa)
	PV05_09958	WD_REPEATS_REGION domain-containing protein. (950 aa)
	PV05_09612	WD_REPEATS_REGION domain-containing protein. (684 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
	PV05_11617	Zinc_ribbon_16 domain-containing protein. (1077 aa)
	PV05_11511	Coronin; Belongs to the WD repeat coronin family. (597 aa)
	PV05_11481	WD_REPEATS_REGION domain-containing protein. (660 aa)
	PV05_11135	Uncharacterized protein. (679 aa)
	PV05_11015	Uncharacterized protein. (670 aa)
	PV05_06414	Uncharacterized protein. (474 aa)
	PV05_01041	WD_REPEATS_REGION domain-containing protein. (508 aa)
	PV05_00883	E3 ubiquitin-protein ligase PEP5. (984 aa)
	PV05_08357	RIC1 domain-containing protein. (1053 aa)
	PV05_08328	WD_REPEATS_REGION domain-containing protein. (318 aa)
	PV05_03769	Guanine nucleotide-binding protein subunit beta-like protein. (316 aa)
	PV05_00513	Pre-mRNA-splicing factor prp46. (434 aa)
	PV05_00443	WD_REPEATS_REGION domain-containing protein. (1082 aa)
	PV05_03450	Uncharacterized protein. (1081 aa)
	PV05_03440	WD_REPEATS_REGION domain-containing protein. (522 aa)
	PV05_00134	Uncharacterized protein. (480 aa)
	PV05_03952	WD_REPEATS_REGION domain-containing protein. (495 aa)
	PV05_10354	Uncharacterized protein. (473 aa)
	PV05_03026	WD_REPEATS_REGION domain-containing protein. (1273 aa)
	PV05_03763	WD_REPEATS_REGION domain-containing protein. (592 aa)
	PV05_03655	WD_REPEATS_REGION domain-containing protein. (626 aa)
	PV05_02732	Uncharacterized protein. (1114 aa)
	PV05_09993	WD_REPEATS_REGION domain-containing protein. (526 aa)
	PV05_03539	WD_REPEATS_REGION domain-containing protein. (555 aa)
	PV05_09888	Uncharacterized protein. (445 aa)
	PV05_02471	Uncharacterized protein. (765 aa)
	PV05_02397	IPPc domain-containing protein. (1254 aa)
	PV05_02364	WD_REPEATS_REGION domain-containing protein. (335 aa)
	PV05_09468	Uncharacterized protein. (493 aa)
	PV05_02856	DUF2415 domain-containing protein. (931 aa)
	PV05_11842	WD_REPEATS_REGION domain-containing protein. (360 aa)
	PV05_11700	WD_REPEATS_REGION domain-containing protein. (705 aa)
	PV05_06004	WD_REPEATS_REGION domain-containing protein. (624 aa)
	PV05_05950	Protein transporter sec13; Belongs to the WD repeat SEC13 family. (312 aa)
	PV05_05093	WD_REPEATS_REGION domain-containing protein. (524 aa)
	PV05_04996	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (474 aa)
	PAC1	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. (457 aa)
	PV05_07017	WD_REPEATS_REGION domain-containing protein. (362 aa)
	PV05_07560	WD_REPEATS_REGION domain-containing protein. (476 aa)
	PV05_06374	Lgl_C domain-containing protein. (1000 aa)
	PV05_09081	WD_REPEATS_REGION domain-containing protein. (339 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	PV05_00785	A0A0D2BDM0	A0A0D2DE66	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.732
ERB1	PV05_00814	A0A0D2BDM0	A0A0D2FKD9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.897
ERB1	PV05_01041	A0A0D2BDM0	A0A0D2EYP1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.906
ERB1	PV05_02337	A0A0D2BDM0	A0A0D2D611	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.917
ERB1	PV05_02471	A0A0D2BDM0	A0A0D2ET49	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.732
ERB1	PV05_03440	A0A0D2BDM0	A0A0D2EW03	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.732
ERB1	PV05_03441	A0A0D2BDM0	A0A0D2C2C8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Utp12 domain-containing protein.	0.812
ERB1	PV05_03539	A0A0D2BDM0	A0A0D2ETN9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.911
ERB1	PV05_03619	A0A0D2BDM0	A0A0D2FGA0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.732
ERB1	PV05_03763	A0A0D2BDM0	A0A0D2EUB3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.946
ERB1	PV05_04134	A0A0D2BDM0	A0A0D2FHQ4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	NUC153 domain-containing protein.	0.835
ERB1	PV05_05002	A0A0D2BDM0	A0A0D2BV29	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.926
ERB1	PV05_06015	A0A0D2BDM0	A0A0D2D573	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.495
ERB1	PV05_07019	A0A0D2BDM0	A0A0D2CWX2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.732
ERB1	PV05_07094	A0A0D2BDM0	A0A0D2BQF0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pre-mRNA-splicing factor rse1.	0.442
ERB1	PV05_07871	A0A0D2BDM0	A0A0D2EBY4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.980
ERB1	PV05_08885	A0A0D2BDM0	A0A0D2BL90	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.631
ERB1	PV05_09302	A0A0D2BDM0	A0A0D2E530	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.629
ERB1	PV05_09468	A0A0D2BDM0	A0A0D2ES84	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.793
ERB1	PV05_09874	A0A0D2BDM0	A0A0D2E6P7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.796