16 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_09373	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV05_07469	Uncharacterized protein. (176 aa)
	PV05_06610	AB hydrolase-1 domain-containing protein. (407 aa)
	PV05_10931	Uncharacterized protein. (197 aa)
	PV05_04049	Uncharacterized protein. (538 aa)
	PV05_02584	AB hydrolase-1 domain-containing protein. (388 aa)
	PV05_02473	Uncharacterized protein. (195 aa)
	PV05_06742	Uncharacterized protein. (190 aa)
	PV05_10488	Uncharacterized protein. (449 aa)
	PV05_00728	Uncharacterized protein. (104 aa)
	PV05_09061	BZIP domain-containing protein. (494 aa)
	PV05_11878	Uncharacterized protein. (880 aa)
	PV05_05079	Polyubiquitin. (305 aa)
	PV05_05901	Uncharacterized protein. (1221 aa)
	PV05_04118	AB hydrolase-1 domain-containing protein. (398 aa)
	PV05_11811	Uncharacterized protein. (158 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00728	PV05_04049	A0A0D2C6N6	A0A0D2DBE2	Uncharacterized protein.	Uncharacterized protein.	0.450
PV05_00728	PV05_05079	A0A0D2C6N6	A0A0D2F8Q2	Uncharacterized protein.	Polyubiquitin.	0.864
PV05_00728	PV05_10931	A0A0D2C6N6	A0A0D2E382	Uncharacterized protein.	Uncharacterized protein.	0.630
PV05_00728	PV05_11811	A0A0D2C6N6	A0A0D2ER01	Uncharacterized protein.	Uncharacterized protein.	0.553
PV05_00728	PV05_11878	A0A0D2C6N6	A0A0D2BDK4	Uncharacterized protein.	Uncharacterized protein.	0.553
PV05_02473	PV05_11811	A0A0D2D6G7	A0A0D2ER01	Uncharacterized protein.	Uncharacterized protein.	0.509
PV05_02473	PV05_11878	A0A0D2D6G7	A0A0D2BDK4	Uncharacterized protein.	Uncharacterized protein.	0.509
PV05_02584	PV05_11811	A0A0D2D6V7	A0A0D2ER01	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.509
PV05_02584	PV05_11878	A0A0D2D6V7	A0A0D2BDK4	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.509
PV05_04049	PV05_00728	A0A0D2DBE2	A0A0D2C6N6	Uncharacterized protein.	Uncharacterized protein.	0.450
PV05_04049	PV05_09061	A0A0D2DBE2	A0A0D2BLT8	Uncharacterized protein.	BZIP domain-containing protein.	0.591
PV05_04049	PV05_09373	A0A0D2DBE2	A0A0D2ERZ6	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.591
PV05_04118	PV05_11811	A0A0D2EVF9	A0A0D2ER01	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.509
PV05_04118	PV05_11878	A0A0D2EVF9	A0A0D2BDK4	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.509
PV05_05079	PV05_00728	A0A0D2F8Q2	A0A0D2C6N6	Polyubiquitin.	Uncharacterized protein.	0.864
PV05_05079	PV05_09061	A0A0D2F8Q2	A0A0D2BLT8	Polyubiquitin.	BZIP domain-containing protein.	0.974
PV05_05079	PV05_09373	A0A0D2F8Q2	A0A0D2ERZ6	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.977
PV05_05079	PV05_10931	A0A0D2F8Q2	A0A0D2E382	Polyubiquitin.	Uncharacterized protein.	0.738
PV05_05079	PV05_11811	A0A0D2F8Q2	A0A0D2ER01	Polyubiquitin.	Uncharacterized protein.	0.517
PV05_05079	PV05_11878	A0A0D2F8Q2	A0A0D2BDK4	Polyubiquitin.	Uncharacterized protein.	0.517