12 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_11025	Uncharacterized protein. (667 aa)
	PV05_01812	Uncharacterized protein. (273 aa)
	PV05_02627	Uncharacterized protein. (541 aa)
	PV05_10623	Uncharacterized protein. (569 aa)
	PV05_10842	Uncharacterized protein. (1136 aa)
	PV05_04645	Biotin-[acetyl-CoA-carboxylase] ligase. (703 aa)
	PV05_10625	Uncharacterized protein. (731 aa)
	PV05_11024	CoA carboxyltransferase C-terminal domain-containing protein. (859 aa)
	PV05_11356	Uncharacterized protein. (2291 aa)
	PV05_09465	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1191 aa)
	PV05_09085	Uncharacterized protein. (591 aa)
	PV05_02630	Uncharacterized protein. (794 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_01812	PV05_02627	A0A0D2DHF1	A0A0D2D6Z4	Uncharacterized protein.	Uncharacterized protein.	0.678
PV05_01812	PV05_02630	A0A0D2DHF1	A0A0D2ETL8	Uncharacterized protein.	Uncharacterized protein.	0.572
PV05_01812	PV05_04645	A0A0D2DHF1	A0A0D2EKI7	Uncharacterized protein.	Biotin-[acetyl-CoA-carboxylase] ligase.	0.761
PV05_01812	PV05_09085	A0A0D2DHF1	A0A0D2F0P9	Uncharacterized protein.	Uncharacterized protein.	0.678
PV05_01812	PV05_10623	A0A0D2DHF1	A0A0D2BI15	Uncharacterized protein.	Uncharacterized protein.	0.678
PV05_01812	PV05_10625	A0A0D2DHF1	A0A0D2E9A1	Uncharacterized protein.	Uncharacterized protein.	0.572
PV05_01812	PV05_11024	A0A0D2DHF1	A0A0D2E3J2	Uncharacterized protein.	CoA carboxyltransferase C-terminal domain-containing protein.	0.678
PV05_01812	PV05_11356	A0A0D2DHF1	A0A0D2E2I3	Uncharacterized protein.	Uncharacterized protein.	0.745
PV05_02627	PV05_01812	A0A0D2D6Z4	A0A0D2DHF1	Uncharacterized protein.	Uncharacterized protein.	0.678
PV05_02627	PV05_02630	A0A0D2D6Z4	A0A0D2ETL8	Uncharacterized protein.	Uncharacterized protein.	0.941
PV05_02627	PV05_04645	A0A0D2D6Z4	A0A0D2EKI7	Uncharacterized protein.	Biotin-[acetyl-CoA-carboxylase] ligase.	0.766
PV05_02627	PV05_09085	A0A0D2D6Z4	A0A0D2F0P9	Uncharacterized protein.	Uncharacterized protein.	0.726
PV05_02627	PV05_09465	A0A0D2D6Z4	A0A0D2BEN2	Uncharacterized protein.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.778
PV05_02627	PV05_10625	A0A0D2D6Z4	A0A0D2E9A1	Uncharacterized protein.	Uncharacterized protein.	0.941
PV05_02627	PV05_10842	A0A0D2D6Z4	A0A0D2EMP8	Uncharacterized protein.	Uncharacterized protein.	0.678
PV05_02627	PV05_11024	A0A0D2D6Z4	A0A0D2E3J2	Uncharacterized protein.	CoA carboxyltransferase C-terminal domain-containing protein.	0.724
PV05_02627	PV05_11025	A0A0D2D6Z4	A0A0D2BAV5	Uncharacterized protein.	Uncharacterized protein.	0.678
PV05_02627	PV05_11356	A0A0D2D6Z4	A0A0D2E2I3	Uncharacterized protein.	Uncharacterized protein.	0.797
PV05_02630	PV05_01812	A0A0D2ETL8	A0A0D2DHF1	Uncharacterized protein.	Uncharacterized protein.	0.572
PV05_02630	PV05_02627	A0A0D2ETL8	A0A0D2D6Z4	Uncharacterized protein.	Uncharacterized protein.	0.941