9 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_01193	NOT2_3_5 domain-containing protein. (486 aa)
	PV05_04032	Uncharacterized protein. (1558 aa)
	PV05_05889	Uncharacterized protein. (465 aa)
	PV05_01410	Uncharacterized protein. (631 aa)
	PV05_04420	CUE domain-containing protein. (199 aa)
	PV05_07939	Cell differentiation protein rcd1. (397 aa)
	PV05_03942	Rhodanese domain-containing protein. (563 aa)
	PV05_08758	Uncharacterized protein. (2308 aa)
	PV05_05125	Protein kinase domain-containing protein. (1065 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_01193	PV05_01410	A0A0D2C7Z9	A0A0D2F2T8	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.983
PV05_01193	PV05_04032	A0A0D2C7Z9	A0A0D2EY08	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.977
PV05_01193	PV05_05889	A0A0D2C7Z9	A0A0D2FB82	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.983
PV05_01193	PV05_07939	A0A0D2C7Z9	A0A0D2EC52	NOT2_3_5 domain-containing protein.	Cell differentiation protein rcd1.	0.983
PV05_01193	PV05_08758	A0A0D2C7Z9	A0A0D2BKX6	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.984
PV05_01410	PV05_01193	A0A0D2F2T8	A0A0D2C7Z9	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.983
PV05_01410	PV05_04032	A0A0D2F2T8	A0A0D2EY08	Uncharacterized protein.	Uncharacterized protein.	0.990
PV05_01410	PV05_04420	A0A0D2F2T8	A0A0D2F6T7	Uncharacterized protein.	CUE domain-containing protein.	0.975
PV05_01410	PV05_05889	A0A0D2F2T8	A0A0D2FB82	Uncharacterized protein.	Uncharacterized protein.	0.992
PV05_01410	PV05_07939	A0A0D2F2T8	A0A0D2EC52	Uncharacterized protein.	Cell differentiation protein rcd1.	0.997
PV05_01410	PV05_08758	A0A0D2F2T8	A0A0D2BKX6	Uncharacterized protein.	Uncharacterized protein.	0.997
PV05_03942	PV05_05125	A0A0D2EXR2	A0A0D2BVG9	Rhodanese domain-containing protein.	Protein kinase domain-containing protein.	0.997
PV05_04032	PV05_01193	A0A0D2EY08	A0A0D2C7Z9	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.977
PV05_04032	PV05_01410	A0A0D2EY08	A0A0D2F2T8	Uncharacterized protein.	Uncharacterized protein.	0.990
PV05_04032	PV05_04420	A0A0D2EY08	A0A0D2F6T7	Uncharacterized protein.	CUE domain-containing protein.	0.966
PV05_04032	PV05_05889	A0A0D2EY08	A0A0D2FB82	Uncharacterized protein.	Uncharacterized protein.	0.993
PV05_04032	PV05_07939	A0A0D2EY08	A0A0D2EC52	Uncharacterized protein.	Cell differentiation protein rcd1.	0.996
PV05_04032	PV05_08758	A0A0D2EY08	A0A0D2BKX6	Uncharacterized protein.	Uncharacterized protein.	0.998
PV05_04420	PV05_01410	A0A0D2F6T7	A0A0D2F2T8	CUE domain-containing protein.	Uncharacterized protein.	0.975
PV05_04420	PV05_04032	A0A0D2F6T7	A0A0D2EY08	CUE domain-containing protein.	Uncharacterized protein.	0.966