15 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_01835	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (415 aa)
	PV05_11150	Serine/threonine-protein kinase pef1; Belongs to the protein kinase superfamily. (407 aa)
	PV05_11545	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (328 aa)
	PV05_09061	BZIP domain-containing protein. (494 aa)
	PV05_05079	Polyubiquitin. (305 aa)
	PV05_00646	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (682 aa)
	PV05_00728	Uncharacterized protein. (104 aa)
	PV05_01921	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (422 aa)
	PV05_09471	RING-type domain-containing protein. (257 aa)
	PV05_10532	CYCLIN domain-containing protein; Belongs to the cyclin family. (374 aa)
	PV05_07243	Uncharacterized protein. (456 aa)
	PV05_10087	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (114 aa)
	PV05_08016	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (476 aa)
	PV05_09373	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV05_03942	Rhodanese domain-containing protein. (563 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00646	PV05_00728	A0A0D2C6A9	A0A0D2C6N6	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.683
PV05_00646	PV05_01835	A0A0D2C6A9	A0A0D2F435	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.407
PV05_00646	PV05_01921	A0A0D2C6A9	A0A0D2CA39	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.799
PV05_00646	PV05_03942	A0A0D2C6A9	A0A0D2EXR2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Rhodanese domain-containing protein.	0.924
PV05_00646	PV05_05079	A0A0D2C6A9	A0A0D2F8Q2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Polyubiquitin.	0.756
PV05_00646	PV05_09061	A0A0D2C6A9	A0A0D2BLT8	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	BZIP domain-containing protein.	0.698
PV05_00646	PV05_09373	A0A0D2C6A9	A0A0D2ERZ6	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Ubiquitin-40S ribosomal protein S27a.	0.698
PV05_00646	PV05_09471	A0A0D2C6A9	A0A0D2CLE6	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	RING-type domain-containing protein.	0.656
PV05_00646	PV05_10087	A0A0D2C6A9	A0A0D2E9M0	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.959
PV05_00646	PV05_10532	A0A0D2C6A9	A0A0D2CPF5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.757
PV05_00646	PV05_11150	A0A0D2C6A9	A0A0D2BBE5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Serine/threonine-protein kinase pef1; Belongs to the protein kinase superfamily.	0.970
PV05_00646	PV05_11545	A0A0D2C6A9	A0A0D2BCR3	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.970
PV05_00728	PV05_00646	A0A0D2C6N6	A0A0D2C6A9	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.683
PV05_00728	PV05_01835	A0A0D2C6N6	A0A0D2F435	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.683
PV05_00728	PV05_01921	A0A0D2C6N6	A0A0D2CA39	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.653
PV05_00728	PV05_03942	A0A0D2C6N6	A0A0D2EXR2	Uncharacterized protein.	Rhodanese domain-containing protein.	0.584
PV05_00728	PV05_05079	A0A0D2C6N6	A0A0D2F8Q2	Uncharacterized protein.	Polyubiquitin.	0.864
PV05_00728	PV05_07243	A0A0D2C6N6	A0A0D2CXN0	Uncharacterized protein.	Uncharacterized protein.	0.627
PV05_00728	PV05_08016	A0A0D2C6N6	A0A0D2ECE4	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.683
PV05_00728	PV05_09471	A0A0D2C6N6	A0A0D2CLE6	Uncharacterized protein.	RING-type domain-containing protein.	0.659