10 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_02733	SET domain-containing protein. (725 aa)
	PV05_04223	Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family. (390 aa)
	PV05_04996	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (474 aa)
	PV05_11075	Cupin_8 domain-containing protein. (1146 aa)
	PV05_10884	Uncharacterized protein. (620 aa)
	PV05_00424	JmjC domain-containing protein. (1160 aa)
	PV05_00675	Serine/threonine-protein phosphatase. (329 aa)
	PV05_02478	Metallophos domain-containing protein. (453 aa)
	PV05_11980	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (429 aa)
	PV05_03942	Rhodanese domain-containing protein. (563 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00424	PV05_00675	A0A0D2DD03	A0A0D2F0L7	JmjC domain-containing protein.	Serine/threonine-protein phosphatase.	0.858
PV05_00424	PV05_02478	A0A0D2DD03	A0A0D2D6H2	JmjC domain-containing protein.	Metallophos domain-containing protein.	0.858
PV05_00424	PV05_04996	A0A0D2DD03	A0A0D2ENI3	JmjC domain-containing protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.787
PV05_00424	PV05_10884	A0A0D2DD03	A0A0D2E346	JmjC domain-containing protein.	Uncharacterized protein.	0.792
PV05_00675	PV05_00424	A0A0D2F0L7	A0A0D2DD03	Serine/threonine-protein phosphatase.	JmjC domain-containing protein.	0.858
PV05_00675	PV05_02733	A0A0D2F0L7	A0A0D2D791	Serine/threonine-protein phosphatase.	SET domain-containing protein.	0.928
PV05_00675	PV05_03942	A0A0D2F0L7	A0A0D2EXR2	Serine/threonine-protein phosphatase.	Rhodanese domain-containing protein.	0.703
PV05_00675	PV05_04223	A0A0D2F0L7	A0A0D2F6E0	Serine/threonine-protein phosphatase.	Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.	0.979
PV05_00675	PV05_04996	A0A0D2F0L7	A0A0D2ENI3	Serine/threonine-protein phosphatase.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.999
PV05_00675	PV05_10884	A0A0D2F0L7	A0A0D2E346	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.999
PV05_00675	PV05_11075	A0A0D2F0L7	A0A0D2E3R0	Serine/threonine-protein phosphatase.	Cupin_8 domain-containing protein.	0.858
PV05_00675	PV05_11980	A0A0D2F0L7	A0A0D2ERG7	Serine/threonine-protein phosphatase.	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	0.984
PV05_02478	PV05_00424	A0A0D2D6H2	A0A0D2DD03	Metallophos domain-containing protein.	JmjC domain-containing protein.	0.858
PV05_02478	PV05_02733	A0A0D2D6H2	A0A0D2D791	Metallophos domain-containing protein.	SET domain-containing protein.	0.928
PV05_02478	PV05_03942	A0A0D2D6H2	A0A0D2EXR2	Metallophos domain-containing protein.	Rhodanese domain-containing protein.	0.563
PV05_02478	PV05_04223	A0A0D2D6H2	A0A0D2F6E0	Metallophos domain-containing protein.	Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.	0.858
PV05_02478	PV05_04996	A0A0D2D6H2	A0A0D2ENI3	Metallophos domain-containing protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.984
PV05_02478	PV05_10884	A0A0D2D6H2	A0A0D2E346	Metallophos domain-containing protein.	Uncharacterized protein.	0.983
PV05_02478	PV05_11075	A0A0D2D6H2	A0A0D2E3R0	Metallophos domain-containing protein.	Cupin_8 domain-containing protein.	0.858
PV05_02478	PV05_11980	A0A0D2D6H2	A0A0D2ERG7	Metallophos domain-containing protein.	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	0.928