120 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_07864	Pre-mRNA-processing ATP-dependent RNA helicase prp5. (1182 aa)
	PV05_02755	Uncharacterized protein. (151 aa)
	PV05_06100	Uncharacterized protein. (667 aa)
	PV05_05923	Uncharacterized protein. (613 aa)
	PV05_05676	Uncharacterized protein. (935 aa)
	PV05_05430	RRM domain-containing protein. (232 aa)
	PV05_05015	Pre-mRNA-splicing factor cwc22. (988 aa)
	PV05_07605	DUF1716 domain-containing protein. (606 aa)
	PV05_02064	RRM domain-containing protein. (197 aa)
	PV05_06435	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (183 aa)
	PV05_01053	Uncharacterized protein. (243 aa)
	PV05_01001	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
	PV05_06216	Uncharacterized protein. (283 aa)
	PV05_00709	J domain-containing protein. (212 aa)
	PV05_00650	Small nuclear ribonucleoprotein Sm D2. (187 aa)
	PV05_01264	Pre-mRNA-splicing factor slt11. (374 aa)
	PV05_00315	MFAP1 domain-containing protein. (518 aa)
	PV05_08705	CID domain-containing protein. (887 aa)
	PV05_01019	Uncharacterized protein. (248 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	PV05_03902	PH domain-containing protein. (1078 aa)
	PV05_00614	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (174 aa)
	PV05_00513	Pre-mRNA-splicing factor prp46. (434 aa)
	PV05_07996	U1-type domain-containing protein. (299 aa)
	PV05_00364	Uncharacterized protein. (1232 aa)
	PV05_00143	Uncharacterized protein. (400 aa)
	PV05_10287	CVNH domain-containing protein. (376 aa)
	PV05_10176	RRM domain-containing protein. (337 aa)
	PV05_10094	Tr-type G domain-containing protein. (982 aa)
	PV05_03709	Tudor domain-containing protein. (293 aa)
	PV05_10077	Uncharacterized protein. (599 aa)
	PV05_09956	Uncharacterized protein. (582 aa)
	PV05_03005	Uncharacterized protein. (217 aa)
	PV05_02871	Sde2_N_Ubi domain-containing protein. (543 aa)
	PV05_05853	Uncharacterized protein. (160 aa)
	PV05_05797	PWI domain-containing protein. (474 aa)
	PV05_11842	WD_REPEATS_REGION domain-containing protein. (360 aa)
	PV05_02522	Pre-mRNA-processing protein 45. (580 aa)
	PV05_11431	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (130 aa)
	PV05_05862	Uncharacterized protein. (396 aa)
	PV05_11187	PHD finger-like domain-containing protein 5B. (110 aa)
	PV05_05093	WD_REPEATS_REGION domain-containing protein. (524 aa)
	PV05_11016	Uncharacterized protein. (326 aa)
	PV05_05162	RRM domain-containing protein. (305 aa)
	PV05_04519	Uncharacterized protein. (2219 aa)
	PV05_04464	C2H2-type domain-containing protein. (161 aa)
	PV05_07530	Uncharacterized protein. (246 aa)
	PV05_04657	Uncharacterized protein. (389 aa)
	PV05_07460	Uncharacterized protein. (374 aa)
	PV05_07356	CVNH domain-containing protein. (399 aa)
	PV05_06879	FHA domain-containing protein. (290 aa)
	PV05_07580	Uncharacterized protein. (547 aa)
	PV05_07576	Pre-mRNA-processing-splicing factor 8, variant. (2358 aa)
	PV05_06843	Uncharacterized protein. (209 aa)
	PV05_08927	Uncharacterized protein. (232 aa)
	PV05_06206	PPIase cyclophilin-type domain-containing protein. (578 aa)
	PV05_08433	G-patch domain-containing protein. (510 aa)
	PV05_08200	Matrin-type domain-containing protein. (235 aa)
	PV05_08695	Protein kinase domain-containing protein. (745 aa)
	PV05_07907	Nop domain-containing protein. (601 aa)
	PV05_07980	Uncharacterized protein. (684 aa)
	PV05_10068	Uncharacterized protein. (990 aa)
	PV05_09620	C2H2-type domain-containing protein. (907 aa)
	PV05_10231	Uncharacterized protein. (208 aa)
	PV05_09757	Uncharacterized protein. (980 aa)
	PV05_11927	Uncharacterized protein. (256 aa)
	PV05_09700	WD_REPEATS_REGION domain-containing protein. (571 aa)
	PV05_11394	Uncharacterized protein. (915 aa)
	PV05_11344	Uncharacterized protein. (473 aa)
	PV05_11188	Pinin_SDK_memA domain-containing protein. (337 aa)
	PV05_11051	F-box domain-containing protein. (612 aa)
	PV05_01596	Uncharacterized protein. (306 aa)
	PV05_00825	Uncharacterized protein. (782 aa)
	PV05_00755	Uncharacterized protein. (359 aa)
	PV05_00433	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (763 aa)
	PV05_00234	Uncharacterized protein. (252 aa)
	PV05_04092	Pre-mRNA-splicing factor cwc15. (228 aa)
	PV05_04054	Uncharacterized protein. (294 aa)
	PV05_03545	G-patch domain-containing protein. (648 aa)
	PV05_02714	Isochorismatase domain-containing protein. (313 aa)
	PV05_05884	Uncharacterized protein. (687 aa)
	PV05_05348	Cwf21 domain-containing protein. (180 aa)
	PV05_05047	Uncharacterized protein. (554 aa)
	PV05_07023	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (468 aa)
	PV05_06559	Uncharacterized protein. (298 aa)
	PV05_06478	Uncharacterized protein. (151 aa)
	PV05_09189	PSP domain-containing protein. (1125 aa)
	PV05_09108	Uncharacterized protein. (588 aa)
	PV05_08871	C2H2-type domain-containing protein. (216 aa)
	PV05_08027	G-patch domain-containing protein. (722 aa)
	PV05_07909	Pre-mRNA-splicing factor clf1. (676 aa)
	PV05_07756	Uncharacterized protein. (371 aa)
	PV05_10257	Uncharacterized protein. (156 aa)
	PV05_09535	Sm domain-containing protein. (225 aa)
	PV05_11879	KIX_2 domain-containing protein. (1476 aa)
	PV05_01243	Uncharacterized protein. (157 aa)
	PV05_00741	Uncharacterized protein. (1685 aa)
	PV05_00340	Uncharacterized protein. (556 aa)
	PV05_03933	RRM domain-containing protein. (116 aa)
	PV05_03027	RRM domain-containing protein. (155 aa)
	PV05_02966	Sde2_N_Ubi domain-containing protein. (340 aa)
	PV05_02539	PUM-HD domain-containing protein. (991 aa)
	PV05_05854	Sm domain-containing protein. (152 aa)
	PV05_04993	Small nuclear ribonucleoprotein G. (69 aa)
	PV05_06822	SesA domain-containing protein. (130 aa)
	PV05_09075	Uncharacterized protein. (307 aa)
	PV05_07899	Cir_N domain-containing protein. (392 aa)
	PV05_10620	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
	PV05_10548	SAP domain-containing protein. (675 aa)
	PV05_10054	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (191 aa)
	PV05_09877	Uncharacterized protein. (213 aa)
	PV05_11821	Uncharacterized protein. (537 aa)
	PV05_11376	Uncharacterized protein. (327 aa)
	PV05_01789	Uncharacterized protein. (616 aa)
	PV05_00144	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	PV05_03953	DUF2040 domain-containing protein. (406 aa)
	PV05_03388	Branchpoint-bridging protein. (546 aa)
	PV05_03213	Slu7 domain-containing protein. (502 aa)
	PV05_02973	Uncharacterized protein. (658 aa)
	PV05_02769	Matrin-type domain-containing protein. (517 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM8	PV05_00143	A0A0D2EYI7	A0A0D2EVW5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.973
LSM8	PV05_00144	A0A0D2EYI7	A0A0D2FIA0	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D3.	0.973
LSM8	PV05_00234	A0A0D2EYI7	A0A0D2DCK7	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.895
LSM8	PV05_00315	A0A0D2EYI7	A0A0D2EZI1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	MFAP1 domain-containing protein.	0.720
LSM8	PV05_00513	A0A0D2EYI7	A0A0D2EX14	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA-splicing factor prp46.	0.637
LSM8	PV05_00614	A0A0D2EYI7	A0A0D2EXC5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.452
LSM8	PV05_00650	A0A0D2EYI7	A0A0D2F0I4	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.991
LSM8	PV05_00825	A0A0D2EYI7	A0A0D2DE97	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.635
LSM8	PV05_01001	A0A0D2EYI7	A0A0D2F1I5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.992
LSM8	PV05_01019	A0A0D2EYI7	A0A0D2EYL4	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.952
LSM8	PV05_01053	A0A0D2EYI7	A0A0D2F1Q1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.727
LSM8	PV05_01264	A0A0D2EYI7	A0A0D2EZJ2	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA-splicing factor slt11.	0.644
LSM8	PV05_01596	A0A0D2EYI7	A0A0D2DGP5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.945
LSM8	PV05_02064	A0A0D2EYI7	A0A0D2F504	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	RRM domain-containing protein.	0.863
LSM8	PV05_02522	A0A0D2EYI7	A0A0D2EQK0	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA-processing protein 45.	0.652
LSM8	PV05_02714	A0A0D2EYI7	A0A0D2D771	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Isochorismatase domain-containing protein.	0.635
LSM8	PV05_02769	A0A0D2EYI7	A0A0D2FDT5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Matrin-type domain-containing protein.	0.933
LSM8	PV05_02973	A0A0D2EYI7	A0A0D2FEG1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.987
LSM8	PV05_03933	A0A0D2EYI7	A0A0D2C3W1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	RRM domain-containing protein.	0.685
LSM8	PV05_04092	A0A0D2EYI7	A0A0D2DBI2	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA-splicing factor cwc15.	0.637