36 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_03703	Uncharacterized protein. (915 aa)
	PV05_09888	Uncharacterized protein. (445 aa)
	PV05_09318	C3H1-type domain-containing protein. (658 aa)
	PV05_05797	PWI domain-containing protein. (474 aa)
	PV05_11362	Uncharacterized protein. (638 aa)
	PV05_11216	NUP214 domain-containing protein. (1474 aa)
	PV05_11099	TPR_MLP1_2 domain-containing protein. (2010 aa)
	PV05_04905	TAP-C domain-containing protein. (432 aa)
	PV05_04593	RanBD1 domain-containing protein. (521 aa)
	PV05_07017	WD_REPEATS_REGION domain-containing protein. (362 aa)
	PV05_07293	Uncharacterized protein. (209 aa)
	PV05_00735	RRM domain-containing protein. (251 aa)
	PV05_00758	Fip1 domain-containing protein. (319 aa)
	PV05_09212	RRM domain-containing protein. (184 aa)
	PV05_06317	Nup54 domain-containing protein. (430 aa)
	PV05_02131	Uncharacterized protein. (720 aa)
	PV05_04329	Uncharacterized protein. (1140 aa)
	PV05_04370	Uncharacterized protein. (1361 aa)
	PV05_03213	Slu7 domain-containing protein. (502 aa)
	PV05_06517	Nup188_C domain-containing protein. (1823 aa)
	PV05_06409	Nsp1_C domain-containing protein. (655 aa)
	PV05_08296	Uncharacterized protein. (572 aa)
	PV05_08381	Uncharacterized protein. (703 aa)
	PV05_08342	Uncharacterized protein. (1340 aa)
	PV05_08059	WD_REPEATS_REGION domain-containing protein. (347 aa)
	PV05_10068	Uncharacterized protein. (990 aa)
	PV05_09777	Uncharacterized protein. (328 aa)
	PV05_09700	WD_REPEATS_REGION domain-containing protein. (571 aa)
	PV05_09506	Uncharacterized protein. (211 aa)
	PV05_11521	Peptidase S59 domain-containing protein. (1901 aa)
	PV05_00599	Uncharacterized protein. (758 aa)
	PV05_00163	Uncharacterized protein. (1680 aa)
	PV05_05921	RRM domain-containing protein. (325 aa)
	PV05_07932	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (965 aa)
	PV05_07787	Uncharacterized protein. (156 aa)
	PV05_00591	RanBD1 domain-containing protein. (267 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00163	PV05_00591	A0A0D2DCA4	A0A0D2EX93	Uncharacterized protein.	RanBD1 domain-containing protein.	0.892
PV05_00163	PV05_00599	A0A0D2DCA4	A0A0D2DDK3	Uncharacterized protein.	Uncharacterized protein.	0.892
PV05_00163	PV05_04329	A0A0D2DCA4	A0A0D2F6L3	Uncharacterized protein.	Uncharacterized protein.	0.999
PV05_00163	PV05_04370	A0A0D2DCA4	A0A0D2F6P6	Uncharacterized protein.	Uncharacterized protein.	0.999
PV05_00163	PV05_04593	A0A0D2DCA4	A0A0D2EMB5	Uncharacterized protein.	RanBD1 domain-containing protein.	0.892
PV05_00163	PV05_04905	A0A0D2DCA4	A0A0D2ENA8	Uncharacterized protein.	TAP-C domain-containing protein.	0.824
PV05_00163	PV05_06317	A0A0D2DCA4	A0A0D2F1T0	Uncharacterized protein.	Nup54 domain-containing protein.	0.996
PV05_00163	PV05_06409	A0A0D2DCA4	A0A0D2EF41	Uncharacterized protein.	Nsp1_C domain-containing protein.	0.978
PV05_00163	PV05_06517	A0A0D2DCA4	A0A0D2EHN4	Uncharacterized protein.	Nup188_C domain-containing protein.	0.975
PV05_00163	PV05_07017	A0A0D2DCA4	A0A0D2EJ22	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.908
PV05_00163	PV05_07932	A0A0D2DCA4	A0A0D2CQL6	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.996
PV05_00163	PV05_08296	A0A0D2DCA4	A0A0D2EDB0	Uncharacterized protein.	Uncharacterized protein.	0.942
PV05_00163	PV05_08342	A0A0D2DCA4	A0A0D2EBH5	Uncharacterized protein.	Uncharacterized protein.	0.994
PV05_00163	PV05_08381	A0A0D2DCA4	A0A0D2EBL1	Uncharacterized protein.	Uncharacterized protein.	0.571
PV05_00163	PV05_11099	A0A0D2DCA4	A0A0D2ENJ7	Uncharacterized protein.	TPR_MLP1_2 domain-containing protein.	0.899
PV05_00163	PV05_11216	A0A0D2DCA4	A0A0D2EP20	Uncharacterized protein.	NUP214 domain-containing protein.	0.981
PV05_00163	PV05_11521	A0A0D2DCA4	A0A0D2E319	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.984
PV05_00591	PV05_00163	A0A0D2EX93	A0A0D2DCA4	RanBD1 domain-containing protein.	Uncharacterized protein.	0.892
PV05_00591	PV05_00735	A0A0D2EX93	A0A0D2EXV0	RanBD1 domain-containing protein.	RRM domain-containing protein.	0.815
PV05_00591	PV05_00758	A0A0D2EX93	A0A0D2F0W4	RanBD1 domain-containing protein.	Fip1 domain-containing protein.	0.497