36 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_04797	RPOL4c domain-containing protein. (152 aa)
	PV05_05543	Uncharacterized protein. (1041 aa)
	PV05_04018	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
	PV05_05591	Fork-head domain-containing protein. (726 aa)
	PV05_06796	Uncharacterized protein. (196 aa)
	PV05_06334	Uncharacterized protein. (407 aa)
	PV05_11650	Uncharacterized protein. (769 aa)
	PV05_05835	GATA-type domain-containing protein. (957 aa)
	PV05_00688	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
	PV05_00686	Uncharacterized protein. (343 aa)
	PV05_00778	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	PV05_01284	Histone H2B; Belongs to the histone H2B family. (141 aa)
	PV05_11161	BTB domain-containing protein. (968 aa)
	PV05_08192	Uncharacterized protein. (76 aa)
	PV05_05047	Uncharacterized protein. (554 aa)
	PV05_05408	Uncharacterized protein. (152 aa)
	PV05_07452	Uncharacterized protein. (376 aa)
	PV05_03611	Uncharacterized protein. (269 aa)
	PV05_00176	Uncharacterized protein. (1220 aa)
	PV05_07839	Uncharacterized protein. (380 aa)
	PV05_08496	Uncharacterized protein; Belongs to the cyclin family. (548 aa)
	PV05_09095	TATA-box-binding protein, variant. (258 aa)
	PV05_09155	Methyltranfer_dom domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (357 aa)
	PV05_07606	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1249 aa)
	PV05_05048	S1 domain-containing protein. (169 aa)
	PV05_06123	Serine/threonine-protein kinase bur1. (668 aa)
	PV05_02944	Uncharacterized protein; Belongs to the cyclin family. (477 aa)
	PV05_03002	Uncharacterized protein. (690 aa)
	PV05_03136	Protein GZF3. (257 aa)
	PV05_10589	Uncharacterized protein. (407 aa)
	PV05_00822	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (548 aa)
	PV05_09142	Uncharacterized protein. (238 aa)
	PV05_00802	RPOLD domain-containing protein. (342 aa)
	PV05_02116	RNA_pol_L_2 domain-containing protein. (126 aa)
	PV05_07561	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1771 aa)
	PV05_04748	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (523 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00686	PV05_00778	A0A0D2C6G9	A0A0D2C6R9	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.957
PV05_00686	PV05_00802	A0A0D2C6G9	A0A0D2F0Z7	Uncharacterized protein.	RPOLD domain-containing protein.	0.947
PV05_00686	PV05_01284	A0A0D2C6G9	A0A0D2C868	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.424
PV05_00686	PV05_02116	A0A0D2C6G9	A0A0D2F530	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.961
PV05_00686	PV05_02944	A0A0D2C6G9	A0A0D2ERR0	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.639
PV05_00686	PV05_03002	A0A0D2C6G9	A0A0D2EUQ1	Uncharacterized protein.	Uncharacterized protein.	0.962
PV05_00686	PV05_03611	A0A0D2C6G9	A0A0D2C2T4	Uncharacterized protein.	Uncharacterized protein.	0.920
PV05_00686	PV05_04018	A0A0D2C6G9	A0A0D2C430	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.951
PV05_00686	PV05_04748	A0A0D2C6G9	A0A0D2F7P7	Uncharacterized protein.	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family.	0.636
PV05_00686	PV05_04797	A0A0D2C6G9	A0A0D2F7V2	Uncharacterized protein.	RPOL4c domain-containing protein.	0.950
PV05_00686	PV05_05047	A0A0D2C6G9	A0A0D2D1U4	Uncharacterized protein.	Uncharacterized protein.	0.914
PV05_00686	PV05_05048	A0A0D2C6G9	A0A0D2ELR1	Uncharacterized protein.	S1 domain-containing protein.	0.950
PV05_00686	PV05_05408	A0A0D2C6G9	A0A0D2D310	Uncharacterized protein.	Uncharacterized protein.	0.947
PV05_00686	PV05_06334	A0A0D2C6G9	A0A0D2BN03	Uncharacterized protein.	Uncharacterized protein.	0.666
PV05_00686	PV05_07452	A0A0D2C6G9	A0A0D2BRN4	Uncharacterized protein.	Uncharacterized protein.	0.982
PV05_00686	PV05_07561	A0A0D2C6G9	A0A0D2F5V3	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.920
PV05_00686	PV05_07606	A0A0D2C6G9	A0A0D2EKW4	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.954
PV05_00686	PV05_07839	A0A0D2C6G9	A0A0D2E9Y6	Uncharacterized protein.	Uncharacterized protein.	0.959
PV05_00686	PV05_08192	A0A0D2C6G9	A0A0D2CRH0	Uncharacterized protein.	Uncharacterized protein.	0.950
PV05_00686	PV05_08496	A0A0D2C6G9	A0A0D2EBZ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.653