20 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_11521	Peptidase S59 domain-containing protein. (1901 aa)
	PV05_00163	Uncharacterized protein. (1680 aa)
	PV05_08247	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	PV05_07932	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (965 aa)
	PV05_07747	Uncharacterized protein. (1250 aa)
	PV05_01721	ELYS domain-containing protein. (307 aa)
	PV05_04322	Uncharacterized protein. (559 aa)
	PV05_08021	Ubiquitin-like domain-containing protein. (101 aa)
	PV05_09816	Uncharacterized protein. (418 aa)
	PV05_08342	Uncharacterized protein. (1340 aa)
	PV05_08381	Uncharacterized protein. (703 aa)
	PV05_06517	Nup188_C domain-containing protein. (1823 aa)
	PV05_07240	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
	PV05_04840	Uncharacterized protein. (798 aa)
	PV05_09888	Uncharacterized protein. (445 aa)
	PV05_03675	Uncharacterized protein. (668 aa)
	PV05_01092	Uncharacterized protein. (479 aa)
	PV05_06480	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (426 aa)
	PV05_04329	Uncharacterized protein. (1140 aa)
	PV05_04370	Uncharacterized protein. (1361 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00163	PV05_01092	A0A0D2DCA4	A0A0D2EYV2	Uncharacterized protein.	Uncharacterized protein.	0.957
PV05_00163	PV05_01721	A0A0D2DCA4	A0A0D2C9I8	Uncharacterized protein.	ELYS domain-containing protein.	0.978
PV05_00163	PV05_03675	A0A0D2DCA4	A0A0D2EWS7	Uncharacterized protein.	Uncharacterized protein.	0.957
PV05_00163	PV05_04329	A0A0D2DCA4	A0A0D2F6L3	Uncharacterized protein.	Uncharacterized protein.	0.999
PV05_00163	PV05_04370	A0A0D2DCA4	A0A0D2F6P6	Uncharacterized protein.	Uncharacterized protein.	0.999
PV05_00163	PV05_04840	A0A0D2DCA4	A0A0D2EN64	Uncharacterized protein.	Uncharacterized protein.	0.749
PV05_00163	PV05_06480	A0A0D2DCA4	A0A0D2F2E0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.990
PV05_00163	PV05_06517	A0A0D2DCA4	A0A0D2EHN4	Uncharacterized protein.	Nup188_C domain-containing protein.	0.975
PV05_00163	PV05_07240	A0A0D2DCA4	A0A0D2EJT8	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.670
PV05_00163	PV05_07747	A0A0D2DCA4	A0A0D2CQ48	Uncharacterized protein.	Uncharacterized protein.	0.996
PV05_00163	PV05_07932	A0A0D2DCA4	A0A0D2CQL6	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.996
PV05_00163	PV05_08021	A0A0D2DCA4	A0A0D2BJ03	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.645
PV05_00163	PV05_08247	A0A0D2DCA4	A0A0D2CRK9	Uncharacterized protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.760
PV05_00163	PV05_08342	A0A0D2DCA4	A0A0D2EBH5	Uncharacterized protein.	Uncharacterized protein.	0.994
PV05_00163	PV05_08381	A0A0D2DCA4	A0A0D2EBL1	Uncharacterized protein.	Uncharacterized protein.	0.571
PV05_00163	PV05_09816	A0A0D2DCA4	A0A0D2BFW2	Uncharacterized protein.	Uncharacterized protein.	0.749
PV05_00163	PV05_11521	A0A0D2DCA4	A0A0D2E319	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.984
PV05_01092	PV05_00163	A0A0D2EYV2	A0A0D2DCA4	Uncharacterized protein.	Uncharacterized protein.	0.957
PV05_01092	PV05_01721	A0A0D2EYV2	A0A0D2C9I8	Uncharacterized protein.	ELYS domain-containing protein.	0.938
PV05_01092	PV05_04329	A0A0D2EYV2	A0A0D2F6L3	Uncharacterized protein.	Uncharacterized protein.	0.961