STRINGSTRING
LCK_00674 LCK_00674 LCK_00675 LCK_00675 xerD xerD ribT ribT scpA scpA scpB scpB rluB rluB LCK_00681 LCK_00681 cmk cmk der der hbsU hbsU LCK_00687 LCK_00687 LCK_00688 LCK_00688 LCK_00695 LCK_00695 aroE aroE aroF aroF aroB aroB aroC aroC aroA aroA tyrA tyrA aroK aroK LCK_00704 LCK_00704 aroD aroD nox nox flpA flpA hisC hisC smc smc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LCK_00674GatB/Yqey domain-containing protein; COG1610S. (147 aa)
LCK_00675Protein of unknown function; COG2996S; Belongs to the CvfB family. (293 aa)
xerDSite-specific recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (298 aa)
ribTPutative reductase. (117 aa)
scpASegregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (258 aa)
scpBSegregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (200 aa)
rluB16S rRNA uridine-516 pseudouridylate synthase; COG1187J; similar to pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family. (249 aa)
LCK_00681Predicted membrane protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. (194 aa)
cmkCytidylate kinase; COG0283F; TIGR00017. (225 aa)
derGTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (437 aa)
hbsUBacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa)
LCK_00687Protein of unknown function. (82 aa)
LCK_00688Related to diketogulonate reductase; COG0656R. (277 aa)
LCK_00695Phosphate/sulphate permease. (181 aa)
aroEShikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (281 aa)
aroF3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; COG2876E. (331 aa)
aroB3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. (360 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (392 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (431 aa)
tyrAPrephenate dehydrogenase; COG0287E. (280 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (267 aa)
LCK_00704Protein of unknown function. (184 aa)
aroD3-dehydroquinate dehydratase; COG0710E. (294 aa)
noxNADH oxidase; COG0446R. (449 aa)
flpAFNR-like transcriptional regulator; COG0664T. (214 aa)
hisCHistidinol-phosphate aminotransferase; COG0079E; TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (354 aa)
smcBarmotin; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1184 aa)
Your Current Organism:
Leuconostoc citreum
NCBI taxonomy Id: 349519
Other names: L. citreum KM20, Leuconostoc citreum KM20, Leuconostoc citreum str. KM20, Leuconostoc citreum strain KM20
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