STRINGSTRING
Mflv_2320 Mflv_2320 nucS nucS Mflv_2338 Mflv_2338 Mflv_2341 Mflv_2341 Mflv_2342 Mflv_2342 Mflv_3551 Mflv_3551
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mflv_2320KEGG: mmc:Mmcs_3874 hypothetical protein. (141 aa)
nucSProtein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. (223 aa)
Mflv_2338KEGG: mva:Mvan_4307 conserved hypothetical protein. (97 aa)
Mflv_2341KEGG: mmc:Mmcs_3863 hypothetical protein. (124 aa)
Mflv_2342Thioredoxin domain; PFAM: Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; KEGG: mmc:Mmcs_3862 thioredoxin domain protein. (298 aa)
Mflv_3551PFAM: UspA domain protein; KEGG: mmc:Mmcs_2992 UspA. (147 aa)
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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