STRINGSTRING
Mflv_0567 Mflv_0567 Mflv_0568 Mflv_0568 Mflv_0572 Mflv_0572 Mflv_0621 Mflv_0621 Mflv_0662 Mflv_0662 Mflv_0663 Mflv_0663
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mflv_0567PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_5626 ring hydroxylating dioxygenase, alpha subunit. (458 aa)
Mflv_0568PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mkm:Mkms_5625 aromatic-ring-hydroxylating dioxygenase, beta subunit. (169 aa)
Mflv_0572PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1634 aromatic-ring-hydroxylating dioxygenase, beta subunit. (181 aa)
Mflv_0621PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_1714 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)
Mflv_0662PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_0488 ring hydroxylating dioxygenase, alpha subunit. (455 aa)
Mflv_0663PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0487 aromatic-ring-hydroxylating dioxygenase, beta subunit. (169 aa)
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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