STRINGSTRING
Mvan_0470 Mvan_0470 Mvan_0483 Mvan_0483 Mvan_0487 Mvan_0487 Mvan_0488 Mvan_0488 Mvan_0489 Mvan_0489 Mvan_0491 Mvan_0491 Mvan_0492 Mvan_0492 Mvan_0493 Mvan_0493 Mvan_0494 Mvan_0494 Mvan_0525 Mvan_0525 nidB3 nidB3 Mvan_0533 Mvan_0533 Mvan_0534 Mvan_0534 Mvan_0539 Mvan_0539 Mvan_0540 Mvan_0540 Mvan_0541 Mvan_0541 Mvan_0542 Mvan_0542 Mvan_0544 Mvan_0544 Mvan_0545 Mvan_0545 Mvan_0546 Mvan_0546 Mvan_0547 Mvan_0547 Mvan_4910 Mvan_4910
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mvan_0470PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase. (296 aa)
Mvan_0483PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit. (169 aa)
Mvan_0487PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit. (169 aa)
Mvan_0488PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1642 ring hydroxylating dioxygenase, alpha subunit. (455 aa)
Mvan_0489PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_1643 short-chain dehydrogenase/reductase SDR. (275 aa)
Mvan_0491KEGG: mmc:Mmcs_1645 hypothetical protein. (361 aa)
Mvan_0492Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1646 Rieske (2Fe-2S) region. (393 aa)
Mvan_0493PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1647 aromatic-ring-hydroxylating dioxygenase, beta subunit. (165 aa)
Mvan_0494PFAM: Sterol-binding domain protein; KEGG: mmc:Mmcs_1648 sterol-binding protein. (132 aa)
Mvan_0525PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1666 ring hydroxylating dioxygenase, alpha subunit. (463 aa)
nidB3PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1667 aromatic-ring-hydroxylating dioxygenase, beta subunit. (180 aa)
Mvan_0533PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1673 ring hydroxylating dioxygenase, alpha subunit. (471 aa)
Mvan_0534PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1674 aromatic-ring-hydroxylating dioxygenase, beta subunit. (184 aa)
Mvan_0539Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1680 Rieske (2Fe-2S) region. (438 aa)
Mvan_0540PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1681 aromatic-ring-hydroxylating dioxygenase, beta subunit. (170 aa)
Mvan_05414,5-dihydroxyphthalate dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_1682 oxidoreductase-like protein. (409 aa)
Mvan_0542PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: mmc:Mmcs_1683 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B. (317 aa)
Mvan_0544PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_1685 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)
Mvan_0545PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase. (296 aa)
Mvan_0546PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1689 ring hydroxylating dioxygenase, alpha subunit. (466 aa)
Mvan_0547PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1690 aromatic-ring-hydroxylating dioxygenase, beta subunit. (172 aa)
Mvan_4910PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpa:MAP0933 hypothetical protein. (390 aa)
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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