STRINGSTRING
Mvan_0538 Mvan_0538 Mvan_0595 Mvan_0595 Mvan_0596 Mvan_0596 Mvan_0597 Mvan_0597 Mvan_4246 Mvan_4246 Mvan_4391 Mvan_4391 Mvan_4392 Mvan_4392 Mvan_4393 Mvan_4393 Mvan_4414 Mvan_4414 Mvan_5234 Mvan_5234 Mvan_5235 Mvan_5235 Mvan_5236 Mvan_5236
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mvan_0538PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1679 alpha/beta hydrolase fold. (299 aa)
Mvan_0595PFAM: Hydratase/decarboxylase; KEGG: mta:Moth_1777 4-oxalocrotonate decarboxylase. (262 aa)
Mvan_0596PFAM: Semialdehyde dehydrogenase, NAD - binding; KEGG: bur:Bcep18194_C7645 semialdehyde dehydrogenase, NAD - binding; Belongs to the acetaldehyde dehydrogenase family. (315 aa)
Mvan_05974-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (338 aa)
Mvan_4246PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3787 alpha/beta hydrolase fold. (288 aa)
Mvan_4391Pyruvate carboxyltransferase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (337 aa)
Mvan_4392Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (318 aa)
Mvan_4393PFAM: Hydratase/decarboxylase; KEGG: nfa:nfa33180 putative hydratase. (283 aa)
Mvan_4414PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_C1186 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BphD). (277 aa)
Mvan_5234Pyruvate carboxyltransferase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (350 aa)
Mvan_5235Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (306 aa)
Mvan_5236PFAM: Hydratase/decarboxylase; KEGG: mmc:Mmcs_4661 4-oxalocrotonate decarboxylase. (261 aa)
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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