STRINGSTRING
nnrE nnrE Mvan_1731 Mvan_1731 Mvan_1791 Mvan_1791 pnp pnp rnj rnj Mvan_2437 Mvan_2437 Mvan_2479 Mvan_2479 Mvan_2609 Mvan_2609 Mvan_3356 Mvan_3356 Mvan_3947 Mvan_3947 rph rph Mvan_4523 Mvan_4523 Mvan_5766 Mvan_5766
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
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Your Input:
nnrECarbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] (470 aa)
Mvan_1731PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_1322 NUDIX hydrolase. (190 aa)
Mvan_1791PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_1393 DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. (494 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (754 aa)
rnjBeta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (558 aa)
Mvan_2437PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_2165 DEAD/DEAH box helicase-like protein. (443 aa)
Mvan_2479PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mmc:Mmcs_2210 3'-5' exonuclease. (426 aa)
Mvan_2609PFAM: Carboxylesterase, type B; KEGG: mmc:Mmcs_2305 carboxylesterase, type B; Belongs to the type-B carboxylesterase/lipase family. (486 aa)
Mvan_3356SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mmc:Mmcs_3005 RNA binding S1. (481 aa)
Mvan_3947TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mmc:Mmcs_3551 ribonuclease, Rne/Rng family. (961 aa)
rphRNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (260 aa)
Mvan_4523PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_4021 NUDIX hydrolase. (178 aa)
Mvan_5766KEGG: mpa:MAP1684 ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. (1310 aa)
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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