STRINGSTRING
Mvan_0487 Mvan_0487 Mvan_0464 Mvan_0464 Mvan_0483 Mvan_0483 Mvan_4416 Mvan_4416 Mvan_0547 Mvan_0547 Mvan_0540 Mvan_0540 Mvan_0534 Mvan_0534 nidB3 nidB3 Mvan_0493 Mvan_0493
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mvan_0487PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit. (169 aa)
Mvan_0464PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1623 aromatic-ring-hydroxylating dioxygenase, beta subunit. (198 aa)
Mvan_0483PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit. (169 aa)
Mvan_4416Benzene 1,2-dioxygenase; PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bxe:Bxe_C1196 biphenyl 2,3-dioxygenase small subunit (BphA2). (187 aa)
Mvan_0547PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1690 aromatic-ring-hydroxylating dioxygenase, beta subunit. (172 aa)
Mvan_0540PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1681 aromatic-ring-hydroxylating dioxygenase, beta subunit. (170 aa)
Mvan_0534PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1674 aromatic-ring-hydroxylating dioxygenase, beta subunit. (184 aa)
nidB3PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1667 aromatic-ring-hydroxylating dioxygenase, beta subunit. (180 aa)
Mvan_0493PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1647 aromatic-ring-hydroxylating dioxygenase, beta subunit. (165 aa)
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.