STRINGSTRING
Mvan_4940 Mvan_4940 Mvan_5460 Mvan_5460 Mvan_3359 Mvan_3359 Mvan_0470 Mvan_0470 Mvan_0203 Mvan_0203 Mvan_0472 Mvan_0472 Mvan_4595 Mvan_4595 Mvan_0545 Mvan_0545
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mvan_4940PFAM: Carotenoid oxygenase; KEGG: mtc:MT0938 dioxygenase, putative. (537 aa)
Mvan_5460PFAM: Carotenoid oxygenase; KEGG: mmc:Mmcs_4867 carotenoid oxygenase. (459 aa)
Mvan_3359PFAM: Carotenoid oxygenase; KEGG: mpa:MAP1324 lignostilbene-alpha,beta-dioxygenase. (502 aa)
Mvan_0470PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase. (296 aa)
Mvan_0203PFAM: Carotenoid oxygenase; KEGG: mpa:MAP1324 lignostilbene-alpha,beta-dioxygenase. (464 aa)
Mvan_0472PFAM: dihydrodipicolinate synthetase; KEGG: mmc:Mmcs_1632 dihydrodipicolinate synthetase; Belongs to the DapA family. (341 aa)
Mvan_4595PFAM: Carotenoid oxygenase; KEGG: mpa:MAP0465 hypothetical protein. (479 aa)
Mvan_0545PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase. (296 aa)
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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