STRINGSTRING
Mvan_5022 Mvan_5022 Mvan_0596 Mvan_0596 Mvan_2745 Mvan_2745 Mvan_3280 Mvan_3280 Mvan_4392 Mvan_4392 Mvan_5025 Mvan_5025 Mvan_5235 Mvan_5235
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mvan_5022KEGG: mmc:Mmcs_4456 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family. (434 aa)
Mvan_0596PFAM: Semialdehyde dehydrogenase, NAD - binding; KEGG: bur:Bcep18194_C7645 semialdehyde dehydrogenase, NAD - binding; Belongs to the acetaldehyde dehydrogenase family. (315 aa)
Mvan_2745TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: mmc:Mmcs_2449 aconitate hydratase 1. (954 aa)
Mvan_3280PFAM: O-methyltransferase, family 3; KEGG: mtc:MT1743 catechol-O-methyltransferase. (244 aa)
Mvan_4392Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (318 aa)
Mvan_5025PFAM: Citrate synthase; KEGG: mbo:Mb0913c citrate synthase; Belongs to the citrate synthase family. (371 aa)
Mvan_5235Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (306 aa)
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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