STRINGSTRING
Clos_0241 Clos_0241 Clos_0881 Clos_0881 Clos_1192 Clos_1192 Clos_1495 Clos_1495 cheB cheB Clos_1506 Clos_1506 Clos_1507 Clos_1507 Clos_1508 Clos_1508 cheD cheD Clos_1560 Clos_1560 Clos_1960 Clos_1960 Clos_2075 Clos_2075 Clos_2370 Clos_2370 Clos_2609 Clos_2609 Clos_2789 Clos_2789
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Clos_0241PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_2943 methyl-accepting chemotaxis sensory transducer. (666 aa)
Clos_0881PFAM: chemotaxis sensory transducer; KEGG: mba:Mbar_A0989 methyl-accepting chemotaxis protein. (510 aa)
Clos_1192PFAM: CheW domain protein; KEGG: chy:CHY_0966 chemotaxis protein CheW. (151 aa)
Clos_1495PFAM: response regulator receiver; KEGG: csc:Csac_1271 response regulator receiver protein. (120 aa)
cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (358 aa)
Clos_1506CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0490 CheA signal transduction histidine kinases. (692 aa)
Clos_1507PFAM: CheW domain protein; KEGG: cth:Cthe_0491 CheW protein. (145 aa)
Clos_1508PFAM: CheC domain protein; KEGG: cth:Cthe_0492 CheC, inhibitor of MCP methylation. (205 aa)
cheDCheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (161 aa)
Clos_1560PFAM: MCP methyltransferase CheR-type; KEGG: cth:Cthe_0717 MCP methyltransferase, CheR-type. (257 aa)
Clos_1960PFAM: response regulator receiver; CheW domain protein; KEGG: bha:BH2262 modulation of CheA activity in response to attractants (chemotaxis protein). (303 aa)
Clos_2075PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: cbo:CBO2811 methyl-accepting chemotaxis protein. (602 aa)
Clos_2370PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4989 hypothetical protein. (679 aa)
Clos_2609PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4989 hypothetical protein. (666 aa)
Clos_2789PFAM: chemotaxis sensory transducer; KEGG: cbo:CBO0693 methyl-accepting chemotaxis protein. (633 aa)
Your Current Organism:
Alkaliphilus oremlandii
NCBI taxonomy Id: 350688
Other names: A. oremlandii OhILAs, Alkaliphilus oremlandii OhILAs, Alkaliphilus oremlandii str. OhILAs, Alkaliphilus oremlandii strain OhILAs, Clostridium oremlandii OhILAs, Clostridium sp. OhILAs
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