STRINGSTRING
LRC190 LRC190 LRC410 LRC410 LRC516 LRC516 RCIX1113 RCIX1113 RCIX1200 RCIX1200 tnp-17 tnp-17 RCIX1518 RCIX1518 RCIX1521 RCIX1521 tnp-2 tnp-2 RCIX172 RCIX172 RCIX1849 RCIX1849 RCIX1997 RCIX1997 RCIX1999 RCIX1999 RCIX2146 RCIX2146 tnp-22 tnp-22 RCIX240 RCIX240 tnp-24 tnp-24 RCIX412 RCIX412 RCIX413 RCIX413 RCIX414 RCIX414 RCIX465 RCIX465 RCIX550 RCIX550 tnp-9 tnp-9 tnp-11 tnp-11 tnp-28 tnp-28 RRC244 RRC244 RRC34 RRC34 RRC427 RRC427 RRC479 RRC479
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LRC190Hypothetical protein. (692 aa)
LRC410Hypothetical protein. (250 aa)
LRC516Hypothetical protein. (260 aa)
RCIX1113Conserved hypothetical protein. (347 aa)
RCIX1200Hypothetical protein. (750 aa)
tnp-17Putative transposase (IS4). (328 aa)
RCIX1518Predicted oligopeptide transporter (OPT superfamily). (553 aa)
RCIX1521Predicted oligopeptide transporter (OPT superfamily). (552 aa)
tnp-2Predicted transposase (IS4). (328 aa)
RCIX172Hypothetical protein. (331 aa)
RCIX1849Hypothetical protein. (368 aa)
RCIX1997Hypothetical protein. (322 aa)
RCIX1999Hypothetical protein. (1632 aa)
RCIX2146Hypothetical protein. (447 aa)
tnp-22Predicted transposase (IS4). (328 aa)
RCIX240Predicted serine/threonine kinase. (373 aa)
tnp-24Predicted transposase (IS4). (328 aa)
RCIX412Hypothetical protein; Similar to RCIX409 and RCIX414. (807 aa)
RCIX413Hypothetical protein. (94 aa)
RCIX414Hypothetical protein; Similar to RCIX409 and RCIX412. (746 aa)
RCIX465Conserved hypothetical protein. (187 aa)
RCIX550Conserved hypothetical protein. (185 aa)
tnp-9Predicted transposase (IS4). (337 aa)
tnp-11Predicted transposase (IS4). (332 aa)
tnp-28Putative transposase (IS4). (337 aa)
RRC244Hypothetical protein. (586 aa)
RRC34Hypothetical protein. (1126 aa)
RRC427Conserved hypothetical protein. (619 aa)
RRC479Hypothetical protein. (196 aa)
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.