STRINGSTRING
LRC2 LRC2 LRC3 LRC3 LRC4 LRC4 RCIX2176 RCIX2176 RCIX319 RCIX319 RCIX848 RCIX848
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LRC2Conserved hypothetical protein. (326 aa)
LRC3ATP-dependent RNA helicase. (746 aa)
LRC4Conserved hypothetical protein. (232 aa)
RCIX2176Putative aldo/keto reductase. (411 aa)
RCIX319Putative aldo/keto reductase (2[4Fe-4S] ferredoxin-domain protein). (374 aa)
RCIX848Conserved hypothetical protein. (104 aa)
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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