STRINGSTRING
ampS ampS RCIX110 RCIX110 RCIX111 RCIX111 gsp-4 gsp-4 gsp-5 gsp-5 RCIX114 RCIX114 RCIX115 RCIX115 RCIX116 RCIX116 RCIX117 RCIX117 RCIX118 RCIX118
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ampSPutative leucyl aminopeptidase. (353 aa)
RCIX110Hypothetical protein. (694 aa)
RCIX111Hypothetical protein. (143 aa)
gsp-4Putative bacterial type II secretion system protein. (652 aa)
gsp-5Putative bacterial type II secretion system protein. (616 aa)
RCIX114Conserved hypothetical protein. (279 aa)
RCIX115Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). (231 aa)
RCIX116Hypothetical protein. (188 aa)
RCIX117Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). (289 aa)
RCIX118Hypothetical protein. (73 aa)
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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