STRINGSTRING
frhB-4 frhB-4 frhB-3 frhB-3 frhB-1 frhB-1 fdhB-4 fdhB-4 fdhB-1 fdhB-1 frhB-2 frhB-2 fdhB-2 fdhB-2 fdhB-3 fdhB-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
frhB-4Coenzyme F420-reducing hydrogenase, beta subunit. (343 aa)
frhB-3Putative coenzyme F420 hydrogenase, beta subunit. (332 aa)
frhB-1Coenzyme F420-reducing hydrogenase, beta subunit. (286 aa)
fdhB-4Formate dehydrogenase, beta subunit. (414 aa)
fdhB-1Formate dehydrogenase, beta subunit. (384 aa)
frhB-2Coenzyme F420-reducing hydrogenase, beta subunit. (288 aa)
fdhB-2Formate dehydrogenase, beta subunit. (347 aa)
fdhB-3Formate dehydrogenase, beta subunit. (369 aa)
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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