STRINGSTRING
echC echC frhG-2 frhG-2 RCIX2382 RCIX2382 frhG-1 frhG-1 mvhG-1 mvhG-1 RCIX483 RCIX483 mvhG-2 mvhG-2 vhtG vhtG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
echCEch hydrogenase, subunit C. (157 aa)
frhG-2Coenzyme F420-reducing hydrogenase, gamma subunit. (232 aa)
RCIX2382Hydrogenase, small subunit-like protein (HycG-like). (247 aa)
frhG-1Coenzyme F420-reducing hydrogenase, gamma subunit. (233 aa)
mvhG-1Coenzyme F420-non-reducing hydrogenase (methyl viologen-reducing hydrogenase), gamma subunit. (306 aa)
RCIX483[NiFe]-hydrogenase, small subunit (EchC-like). (135 aa)
mvhG-2Coenzyme F420-non-reducing hydrogenase (methyl viologen-reducing hydrogenase), gamma subunit. (305 aa)
vhtGF420-nonreducing hydrogenase (membrane-bound),small subunit. (388 aa)
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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