STRINGSTRING
LRC263 LRC263 pcrA pcrA dam dam mutSb mutSb LRC57 LRC57 mutSa mutSa RCIX2021 RCIX2021 recJ recJ pcn pcn RCIX2741 RCIX2741 RCIX407 RCIX407 lig lig
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LRC263Hypothetical protein. (338 aa)
pcrAPutative ATP-dependent DNA helicase; Identical to orf21 of fosmid clone 3D10mr4. (1075 aa)
damN6 adenine-specific DNA-methyltransferase; Identical to orf27 of fosmid clone 3D10mr4. (310 aa)
mutSbPutative DNA mismatch repair protein, N-terminal fragment. (565 aa)
LRC57Putative single-stranded DNA-specific exonuclease (RecJ-like). (430 aa)
mutSaPutative DNA mismatch repair protein, C-terminal fragment. (122 aa)
RCIX2021Putative phosphoesterase. (319 aa)
recJPutative single-stranded DNA-specific exonuclease. (461 aa)
pcnPutative DNA polymerase sliding clamp (proliferating cell nuclear antigen); Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family. (246 aa)
RCIX2741Putative phosphoesterase. (325 aa)
RCIX407Conserved hypothetical protein. (307 aa)
ligATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (568 aa)
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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