STRINGSTRING
B8BQK8_THAPS B8BQK8_THAPS ITS2 ITS2 B8BV30_THAPS B8BV30_THAPS B8BX26_THAPS B8BX26_THAPS LEUS LEUS ITS3 ITS3 B8BYR1_THAPS B8BYR1_THAPS B8C444_THAPS B8C444_THAPS B8C7D6_THAPS B8C7D6_THAPS ITS1 ITS1 MTS MTS B8CA55_THAPS B8CA55_THAPS B8CBA7_THAPS B8CBA7_THAPS B8CBE9_THAPS B8CBE9_THAPS B8CGL5_THAPS B8CGL5_THAPS B8LCI1_THAPS B8LCI1_THAPS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B8BQK8_THAPStRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (538 aa)
ITS2Isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1083 aa)
B8BV30_THAPSAA_TRNA_LIGASE_II domain-containing protein. (517 aa)
B8BX26_THAPSLysine--tRNA ligase. (502 aa)
LEUSLeucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (907 aa)
ITS3Probable isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1103 aa)
B8BYR1_THAPSArginyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (602 aa)
B8C444_THAPSUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (538 aa)
B8C7D6_THAPSLysine--tRNA ligase. (610 aa)
ITS1Isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1056 aa)
MTSProbable methionyl-trna synthetase. (176 aa)
B8CA55_THAPStRNA-binding domain-containing protein. (177 aa)
B8CBA7_THAPSDALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (553 aa)
B8CBE9_THAPSGlutamyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (521 aa)
B8CGL5_THAPStRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (522 aa)
B8LCI1_THAPSProlyl-trna synthetase. (521 aa)
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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