12 items (Thalassiosira pseudonana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B8BU46_THAPS	GIDA_assoc domain-containing protein. (769 aa)
	B8BVM3_THAPS	Thioredoxin domain-containing protein. (457 aa)
	B8C0R1_THAPS	Uncharacterized protein. (548 aa)
	B8C0R7_THAPS	ATP_bind_3 domain-containing protein. (999 aa)
	B8C4T4_THAPS	SpoU_methylase domain-containing protein. (167 aa)
	B8C6K0_THAPS	SpoU_methylase domain-containing protein. (416 aa)
	B8C9J1_THAPS	PseudoU_synth_2 domain-containing protein. (280 aa)
	B8CC20_THAPS	Hflx-type G domain-containing protein. (453 aa)
	B8CCP6_THAPS	tRNA-methyltransferase. (392 aa)
	B8CF78_THAPS	Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (472 aa)
	B8LD38_THAPS	Predicted protein. (432 aa)
	B8LDI7_THAPS	Predicted protein. (509 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BU46_THAPS	B8CCP6_THAPS	B8BU46	B8CCP6	GIDA_assoc domain-containing protein.	tRNA-methyltransferase.	0.485
B8BU46_THAPS	B8CF78_THAPS	B8BU46	B8CF78	GIDA_assoc domain-containing protein.	Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.851
B8BU46_THAPS	B8LDI7_THAPS	B8BU46	B8LDI7	GIDA_assoc domain-containing protein.	Predicted protein.	0.485
B8BVM3_THAPS	B8CF78_THAPS	B8BVM3	B8CF78	Thioredoxin domain-containing protein.	Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.635
B8C0R1_THAPS	B8C0R7_THAPS	B8C0R1	B8C0R7	Uncharacterized protein.	ATP_bind_3 domain-containing protein.	0.472
B8C0R1_THAPS	B8C4T4_THAPS	B8C0R1	B8C4T4	Uncharacterized protein.	SpoU_methylase domain-containing protein.	0.531
B8C0R1_THAPS	B8C6K0_THAPS	B8C0R1	B8C6K0	Uncharacterized protein.	SpoU_methylase domain-containing protein.	0.537
B8C0R1_THAPS	B8C9J1_THAPS	B8C0R1	B8C9J1	Uncharacterized protein.	PseudoU_synth_2 domain-containing protein.	0.650
B8C0R1_THAPS	B8CC20_THAPS	B8C0R1	B8CC20	Uncharacterized protein.	Hflx-type G domain-containing protein.	0.824
B8C0R1_THAPS	B8CCP6_THAPS	B8C0R1	B8CCP6	Uncharacterized protein.	tRNA-methyltransferase.	0.425
B8C0R1_THAPS	B8LD38_THAPS	B8C0R1	B8LD38	Uncharacterized protein.	Predicted protein.	0.451
B8C0R1_THAPS	B8LDI7_THAPS	B8C0R1	B8LDI7	Uncharacterized protein.	Predicted protein.	0.425
B8C0R7_THAPS	B8C0R1_THAPS	B8C0R7	B8C0R1	ATP_bind_3 domain-containing protein.	Uncharacterized protein.	0.472
B8C0R7_THAPS	B8C9J1_THAPS	B8C0R7	B8C9J1	ATP_bind_3 domain-containing protein.	PseudoU_synth_2 domain-containing protein.	0.571
B8C4T4_THAPS	B8C0R1_THAPS	B8C4T4	B8C0R1	SpoU_methylase domain-containing protein.	Uncharacterized protein.	0.531
B8C4T4_THAPS	B8C6K0_THAPS	B8C4T4	B8C6K0	SpoU_methylase domain-containing protein.	SpoU_methylase domain-containing protein.	0.523
B8C6K0_THAPS	B8C0R1_THAPS	B8C6K0	B8C0R1	SpoU_methylase domain-containing protein.	Uncharacterized protein.	0.537
B8C6K0_THAPS	B8C4T4_THAPS	B8C6K0	B8C4T4	SpoU_methylase domain-containing protein.	SpoU_methylase domain-containing protein.	0.523
B8C6K0_THAPS	B8C9J1_THAPS	B8C6K0	B8C9J1	SpoU_methylase domain-containing protein.	PseudoU_synth_2 domain-containing protein.	0.599
B8C6K0_THAPS	B8CC20_THAPS	B8C6K0	B8CC20	SpoU_methylase domain-containing protein.	Hflx-type G domain-containing protein.	0.401