(10 nodes) Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain, and FAD-linked oxidase, C-terminal network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THAPS_25322	Predicted protein. (633 aa)
	THAPS_7230	Predicted protein. (257 aa)
	B8BTC4_THAPS	Uncharacterized protein. (736 aa)
	B8BVI2_THAPS	Glycerate dehydrogenase and hydroxypyruvate reductase-like protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (340 aa)
	B8BXJ5_THAPS	L-lactate dehydrogenase. (431 aa)
	B8C5X2_THAPS	2-Hacid_dh_C domain-containing protein. (102 aa)
	B8C7B6_THAPS	FAD-binding PCMH-type domain-containing protein. (366 aa)
	B8CB58_THAPS	2-Hacid_dh_C domain-containing protein. (249 aa)
	B8CEV7_THAPS	Fad-linked oxidase. (529 aa)
	B8LC81_THAPS	Predicted protein. (299 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BTC4_THAPS	B8BXJ5_THAPS	B8BTC4	B8BXJ5	Uncharacterized protein.	L-lactate dehydrogenase.	0.828
B8BTC4_THAPS	B8CB58_THAPS	B8BTC4	B8CB58	Uncharacterized protein.	2-Hacid_dh_C domain-containing protein.	0.400
B8BVI2_THAPS	B8BXJ5_THAPS	B8BVI2	B8BXJ5	Glycerate dehydrogenase and hydroxypyruvate reductase-like protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	L-lactate dehydrogenase.	0.407
B8BXJ5_THAPS	B8BTC4_THAPS	B8BXJ5	B8BTC4	L-lactate dehydrogenase.	Uncharacterized protein.	0.828
B8BXJ5_THAPS	B8BVI2_THAPS	B8BXJ5	B8BVI2	L-lactate dehydrogenase.	Glycerate dehydrogenase and hydroxypyruvate reductase-like protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.407
B8BXJ5_THAPS	B8C5X2_THAPS	B8BXJ5	B8C5X2	L-lactate dehydrogenase.	2-Hacid_dh_C domain-containing protein.	0.404
B8BXJ5_THAPS	B8C7B6_THAPS	B8BXJ5	B8C7B6	L-lactate dehydrogenase.	FAD-binding PCMH-type domain-containing protein.	0.587
B8BXJ5_THAPS	B8CB58_THAPS	B8BXJ5	B8CB58	L-lactate dehydrogenase.	2-Hacid_dh_C domain-containing protein.	0.405
B8BXJ5_THAPS	B8CEV7_THAPS	B8BXJ5	B8CEV7	L-lactate dehydrogenase.	Fad-linked oxidase.	0.516
B8BXJ5_THAPS	THAPS_25322	B8BXJ5	B5YLH1	L-lactate dehydrogenase.	Predicted protein.	0.589
B8C5X2_THAPS	B8BXJ5_THAPS	B8C5X2	B8BXJ5	2-Hacid_dh_C domain-containing protein.	L-lactate dehydrogenase.	0.404
B8C7B6_THAPS	B8BXJ5_THAPS	B8C7B6	B8BXJ5	FAD-binding PCMH-type domain-containing protein.	L-lactate dehydrogenase.	0.587
B8C7B6_THAPS	B8LC81_THAPS	B8C7B6	B8LC81	FAD-binding PCMH-type domain-containing protein.	Predicted protein.	0.707
B8CB58_THAPS	B8BTC4_THAPS	B8CB58	B8BTC4	2-Hacid_dh_C domain-containing protein.	Uncharacterized protein.	0.400
B8CB58_THAPS	B8BXJ5_THAPS	B8CB58	B8BXJ5	2-Hacid_dh_C domain-containing protein.	L-lactate dehydrogenase.	0.405
B8CEV7_THAPS	B8BXJ5_THAPS	B8CEV7	B8BXJ5	Fad-linked oxidase.	L-lactate dehydrogenase.	0.516
B8CEV7_THAPS	B8LC81_THAPS	B8CEV7	B8LC81	Fad-linked oxidase.	Predicted protein.	0.537
B8LC81_THAPS	B8C7B6_THAPS	B8LC81	B8C7B6	Predicted protein.	FAD-binding PCMH-type domain-containing protein.	0.707
B8LC81_THAPS	B8CEV7_THAPS	B8LC81	B8CEV7	Predicted protein.	Fad-linked oxidase.	0.537
B8LC81_THAPS	THAPS_25322	B8LC81	B5YLH1	Predicted protein.	Predicted protein.	0.702