(23 nodes) Mixed, incl. Aromatic amino acid family catabolic process, and Phenylalanine metabolism network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AAT1_2	Aspartate aminotransferase. (416 aa)
	HDP1	4-hydroxyphenylpyruvate dioxygenase. (418 aa)
	B8BUB3_THAPS	FAA_hydrolase domain-containing protein. (238 aa)
	SPR1	Sepiapterin reductase. (137 aa)
	B8BWK9_THAPS	PALP domain-containing protein. (412 aa)
	B8BWT1_THAPS	Uncharacterized protein. (339 aa)
	B8BZV7_THAPS	Fumarylacetoacetase. (488 aa)
	B8BZV8_THAPS	Uncharacterized protein. (220 aa)
	B8C0X0_THAPS	Tyrosine aminotransferase. (561 aa)
	B8C1E8_THAPS	Aminotransferase. (392 aa)
	THAPSDRAFT_460	Aminotransferase. (455 aa)
	B8C2R0_THAPS	Uncharacterized protein. (699 aa)
	B8C4S8_THAPS	Probable homogentisate 1,2-dioxygenase. (477 aa)
	AHC3	Adenosylhomocysteinase. (481 aa)
	B8C653_THAPS	Uncharacterized protein. (299 aa)
	B8C9F6_THAPS	Uncharacterized protein. (567 aa)
	B8CBP3_THAPS	Uncharacterized protein. (81 aa)
	B8CBV4_THAPS	Uncharacterized protein. (395 aa)
	B8CD64_THAPS	Uncharacterized protein. (503 aa)
	B8CF21_THAPS	Catalase-peroxidase. (735 aa)
	B8CFF5_THAPS	FAD-binding PCMH-type domain-containing protein. (1316 aa)
	B8CG93_THAPS	Aspartate aminotransferase. (444 aa)
	PAH1	Simliar to phenylalanine-4-hydroxylase. (395 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAT1_2	B8BUB3_THAPS	B5YN39	B8BUB3	Aspartate aminotransferase.	FAA_hydrolase domain-containing protein.	0.402
AAT1_2	B8BZV7_THAPS	B5YN39	B8BZV7	Aspartate aminotransferase.	Fumarylacetoacetase.	0.484
AAT1_2	B8C0X0_THAPS	B5YN39	B8C0X0	Aspartate aminotransferase.	Tyrosine aminotransferase.	0.949
AAT1_2	B8C2R0_THAPS	B5YN39	B8C2R0	Aspartate aminotransferase.	Uncharacterized protein.	0.501
AAT1_2	B8C4S8_THAPS	B5YN39	B8C4S8	Aspartate aminotransferase.	Probable homogentisate 1,2-dioxygenase.	0.562
AAT1_2	B8CBP3_THAPS	B5YN39	B8CBP3	Aspartate aminotransferase.	Uncharacterized protein.	0.671
AAT1_2	B8CF21_THAPS	B5YN39	B8CF21	Aspartate aminotransferase.	Catalase-peroxidase.	0.912
AAT1_2	B8CG93_THAPS	B5YN39	B8CG93	Aspartate aminotransferase.	Aspartate aminotransferase.	0.920
AAT1_2	HDP1	B5YN39	B8BU80	Aspartate aminotransferase.	4-hydroxyphenylpyruvate dioxygenase.	0.947
AAT1_2	PAH1	B5YN39	B8LE69	Aspartate aminotransferase.	Simliar to phenylalanine-4-hydroxylase.	0.963
AAT1_2	THAPSDRAFT_460	B5YN39	B8C2D3	Aspartate aminotransferase.	Aminotransferase.	0.920
AHC3	B8C0X0_THAPS	B8C553	B8C0X0	Adenosylhomocysteinase.	Tyrosine aminotransferase.	0.493
AHC3	B8C4S8_THAPS	B8C553	B8C4S8	Adenosylhomocysteinase.	Probable homogentisate 1,2-dioxygenase.	0.541
AHC3	B8C653_THAPS	B8C553	B8C653	Adenosylhomocysteinase.	Uncharacterized protein.	0.432
AHC3	HDP1	B8C553	B8BU80	Adenosylhomocysteinase.	4-hydroxyphenylpyruvate dioxygenase.	0.470
AHC3	THAPSDRAFT_460	B8C553	B8C2D3	Adenosylhomocysteinase.	Aminotransferase.	0.915
B8BUB3_THAPS	AAT1_2	B8BUB3	B5YN39	FAA_hydrolase domain-containing protein.	Aspartate aminotransferase.	0.402
B8BUB3_THAPS	B8C2R0_THAPS	B8BUB3	B8C2R0	FAA_hydrolase domain-containing protein.	Uncharacterized protein.	0.465
B8BUB3_THAPS	B8C4S8_THAPS	B8BUB3	B8C4S8	FAA_hydrolase domain-containing protein.	Probable homogentisate 1,2-dioxygenase.	0.740
B8BUB3_THAPS	HDP1	B8BUB3	B8BU80	FAA_hydrolase domain-containing protein.	4-hydroxyphenylpyruvate dioxygenase.	0.466