(5 nodes) Vitamin B2 (riboflavin) metabolism network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THAPS_38111	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (289 aa)
	B8BQ79_THAPS	Acid phosphatase. (370 aa)
	B8BQL2_THAPS	Uncharacterized protein. (353 aa)
	B8C262_THAPS	Flavokinase domain-containing protein. (322 aa)
	B8C967_THAPS	Riboflavin kinase/FAD synthetase. (171 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BQ79_THAPS	B8BQL2_THAPS	B8BQ79	B8BQL2	Acid phosphatase.	Uncharacterized protein.	0.902
B8BQ79_THAPS	B8C262_THAPS	B8BQ79	B8C262	Acid phosphatase.	Flavokinase domain-containing protein.	0.909
B8BQ79_THAPS	B8C967_THAPS	B8BQ79	B8C967	Acid phosphatase.	Riboflavin kinase/FAD synthetase.	0.909
B8BQL2_THAPS	B8BQ79_THAPS	B8BQL2	B8BQ79	Uncharacterized protein.	Acid phosphatase.	0.902
B8BQL2_THAPS	B8C262_THAPS	B8BQL2	B8C262	Uncharacterized protein.	Flavokinase domain-containing protein.	0.947
B8BQL2_THAPS	B8C967_THAPS	B8BQL2	B8C967	Uncharacterized protein.	Riboflavin kinase/FAD synthetase.	0.948
B8BQL2_THAPS	THAPS_38111	B8BQL2	B5YLY4	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.546
B8C262_THAPS	B8BQ79_THAPS	B8C262	B8BQ79	Flavokinase domain-containing protein.	Acid phosphatase.	0.909
B8C262_THAPS	B8BQL2_THAPS	B8C262	B8BQL2	Flavokinase domain-containing protein.	Uncharacterized protein.	0.947
B8C262_THAPS	B8C967_THAPS	B8C262	B8C967	Flavokinase domain-containing protein.	Riboflavin kinase/FAD synthetase.	0.909
B8C967_THAPS	B8BQ79_THAPS	B8C967	B8BQ79	Riboflavin kinase/FAD synthetase.	Acid phosphatase.	0.909
B8C967_THAPS	B8BQL2_THAPS	B8C967	B8BQL2	Riboflavin kinase/FAD synthetase.	Uncharacterized protein.	0.948
B8C967_THAPS	B8C262_THAPS	B8C967	B8C262	Riboflavin kinase/FAD synthetase.	Flavokinase domain-containing protein.	0.909
THAPS_38111	B8BQL2_THAPS	B5YLY4	B8BQL2	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.546