(66 nodes) Mixed, incl. Respirasome, and NAD(P)-binding domain network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	petA	Cytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (314 aa)
	petB	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
	petD	Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (160 aa)
	THAPS_6876	Predicted protein. (246 aa)
	THAPS_7031	Predicted protein. (185 aa)
	THAPS_17707	Predicted protein. (260 aa)
	THAPS_35642	Predicted protein. (61 aa)
	B8BQV4_THAPS	Uncharacterized protein. (176 aa)
	B8BRC3_THAPS	Uncharacterized protein. (150 aa)
	B8BSI6_THAPS	Uncharacterized protein. (72 aa)
	B8BVG6_THAPS	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (212 aa)
	B8BWG1_THAPS	Uncharacterized protein. (571 aa)
	B8BWT6_THAPS	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (244 aa)
	B8BWV3_THAPS	Abhydrolase_3 domain-containing protein. (474 aa)
	risp1	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (168 aa)
	B8BXK9_THAPS	Uncharacterized protein. (209 aa)
	B8BXU7_THAPS	NAD(P)-bd_dom domain-containing protein. (472 aa)
	B8BY32_THAPS	NAD(P)-bd_dom domain-containing protein. (252 aa)
	B8BYR3_THAPS	CIA30 domain-containing protein. (315 aa)
	B8C036_THAPS	NAD(P)-bd_dom domain-containing protein. (276 aa)
	B8C103_THAPS	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (84 aa)
	B8C1U1_THAPS	Cytochrome c domain-containing protein. (106 aa)
	B8C1W6_THAPS	Uncharacterized protein. (430 aa)
	B8C215_THAPS	Uncharacterized protein. (289 aa)
	B8C232_THAPS	Abhydrolase_3 domain-containing protein. (341 aa)
	B8C2F0_THAPS	Rad51/RecA-like protein. (430 aa)
	B8C2H3_THAPS	Uncharacterized protein. (203 aa)
	B8C338_THAPS	Lipase/esterase. (217 aa)
	B8C3P0_THAPS	Phospholipase. (300 aa)
	B8C3P8_THAPS	Hydrolase_4 domain-containing protein. (294 aa)
	B8C4C1_THAPS	Probable mitochondrial processing peptidase; Belongs to the peptidase M16 family. (481 aa)
	B8C4C5_THAPS	Uncharacterized protein. (278 aa)
	ACP3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (77 aa)
	B8C5T0_THAPS	Peptidase_M16_C domain-containing protein. (426 aa)
	B8C5Z0_THAPS	Uncharacterized protein. (87 aa)
	B8C6E5_THAPS	Thioredoxin domain-containing protein. (173 aa)
	B8C6L5_THAPS	Cytochrome c domain-containing protein. (133 aa)
	B8C6T1_THAPS	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (108 aa)
	B8C704_THAPS	NADH dehydrogenase. (261 aa)
	B8C7Q3_THAPS	Uncharacterized protein. (593 aa)
	B8C885_THAPS	Hydrolase_4 domain-containing protein. (283 aa)
	B8C8S2_THAPS	Uncharacterized protein. (108 aa)
	B8C955_THAPS	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (216 aa)
	B8C9G5_THAPS	Epimerase domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (813 aa)
	B8C9K8_THAPS	Hydrolase_4 domain-containing protein. (358 aa)
	B8CBC6_THAPS	Uncharacterized protein. (183 aa)
	B8CBE7_THAPS	NAD(P)-bd_dom domain-containing protein. (277 aa)
	B8CBG7_THAPS	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (499 aa)
	B8CBP1_THAPS	Ubiquinol cytochrome c reductase. (78 aa)
	THAPSDRAFT_735	NADH dehydrogenase. (150 aa)
	B8CD46_THAPS	NAD(P)-bd_dom domain-containing protein. (313 aa)
	B8CDS8_THAPS	Nadh-ubiquinone oxidoreductase. (319 aa)
	B8CE04_THAPS	NAD(P)-bd_dom domain-containing protein. (282 aa)
	B8CE88_THAPS	NAD(P)-bd_dom domain-containing protein. (398 aa)
	B8CEH4_THAPS	Uncharacterized protein. (432 aa)
	B8CFY7_THAPS	NAD(P)-bd_dom domain-containing protein. (327 aa)
	B8LBP8_THAPS	Predicted protein. (254 aa)
	B8LBQ0_THAPS	NAD(P)-bd_dom domain-containing protein. (256 aa)
	B8LBW3_THAPS	NAD(P)-bd_dom domain-containing protein. (227 aa)
	B8LC69_THAPS	Predicted protein. (149 aa)
	PETC2	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (181 aa)
	B8LD94_THAPS	Predicted protein. (105 aa)
	B8LDE7_THAPS	Predicted protein. (72 aa)
	B8LDW8_THAPS	Cytochrome c1. (277 aa)
	petF_2	Cytochrome b6-f complex subunit 4. (160 aa)
	petB-2	Cytochrome B6. (215 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACP3	B8BQV4_THAPS	B8C5G6	B8BQV4	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.493
ACP3	B8BRC3_THAPS	B8C5G6	B8BRC3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.497
ACP3	B8BSI6_THAPS	B8C5G6	B8BSI6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.826
ACP3	B8BVG6_THAPS	B8C5G6	B8BVG6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	0.773
ACP3	B8BWG1_THAPS	B8C5G6	B8BWG1	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.660
ACP3	B8BWT6_THAPS	B8C5G6	B8BWT6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.960
ACP3	B8BWV3_THAPS	B8C5G6	B8BWV3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Abhydrolase_3 domain-containing protein.	0.499
ACP3	B8BXK9_THAPS	B8C5G6	B8BXK9	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.619
ACP3	B8BXU7_THAPS	B8C5G6	B8BXU7	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NAD(P)-bd_dom domain-containing protein.	0.619
ACP3	B8BY32_THAPS	B8C5G6	B8BY32	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NAD(P)-bd_dom domain-containing protein.	0.619
ACP3	B8BYR3_THAPS	B8C5G6	B8BYR3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	CIA30 domain-containing protein.	0.619
ACP3	B8C036_THAPS	B8C5G6	B8C036	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NAD(P)-bd_dom domain-containing protein.	0.631
ACP3	B8C215_THAPS	B8C5G6	B8C215	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.492
ACP3	B8C232_THAPS	B8C5G6	B8C232	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Abhydrolase_3 domain-containing protein.	0.500
ACP3	B8C2F0_THAPS	B8C5G6	B8C2F0	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Rad51/RecA-like protein.	0.660
ACP3	B8C2H3_THAPS	B8C5G6	B8C2H3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.492
ACP3	B8C338_THAPS	B8C5G6	B8C338	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Lipase/esterase.	0.492
ACP3	B8C3P0_THAPS	B8C5G6	B8C3P0	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Phospholipase.	0.611
ACP3	B8C3P8_THAPS	B8C5G6	B8C3P8	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Hydrolase_4 domain-containing protein.	0.614
ACP3	B8C4C1_THAPS	B8C5G6	B8C4C1	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Probable mitochondrial processing peptidase; Belongs to the peptidase M16 family.	0.819