(12 nodes) Fatty acid biosynthesis, and Beta-oxidation of very long chain fatty acids network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACC	Acetyl-coa carboxylase. (2088 aa)
	THAPSDRAFT_961	Ketoacyl_synth_N domain-containing protein. (565 aa)
	B8BTK3_THAPS	Uncharacterized protein. (317 aa)
	B8BUL7_THAPS	Uncharacterized protein. (563 aa)
	B8BVD1_THAPS	Uncharacterized protein. (2251 aa)
	EAR1	Enoyl-reductase [NADH]. (312 aa)
	B8C1R1_THAPS	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (465 aa)
	MCT1	Malonyl coa-acyl carrier protein transacylase. (356 aa)
	B8C490_THAPS	FabA domain-containing protein. (142 aa)
	KAS2	Probable beta-ketoacyl-acyl carrier protein synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (470 aa)
	KAS3	3-oxoacyl-synthase. (380 aa)
	B8LDX1_THAPS	Predicted protein. (587 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACC	B8BUL7_THAPS	B5YMF5	B8BUL7	Acetyl-coa carboxylase.	Uncharacterized protein.	0.923
ACC	B8BVD1_THAPS	B5YMF5	B8BVD1	Acetyl-coa carboxylase.	Uncharacterized protein.	0.909
ACC	B8C1R1_THAPS	B5YMF5	B8C1R1	Acetyl-coa carboxylase.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.450
ACC	KAS2	B5YMF5	B8C5X7	Acetyl-coa carboxylase.	Probable beta-ketoacyl-acyl carrier protein synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.436
ACC	KAS3	B5YMF5	B8CGL6	Acetyl-coa carboxylase.	3-oxoacyl-synthase.	0.936
ACC	MCT1	B5YMF5	B8C2A9	Acetyl-coa carboxylase.	Malonyl coa-acyl carrier protein transacylase.	0.952
ACC	THAPSDRAFT_961	B5YMF5	B8BSY1	Acetyl-coa carboxylase.	Ketoacyl_synth_N domain-containing protein.	0.436
B8BTK3_THAPS	B8C1R1_THAPS	B8BTK3	B8C1R1	Uncharacterized protein.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.952
B8BTK3_THAPS	B8C490_THAPS	B8BTK3	B8C490	Uncharacterized protein.	FabA domain-containing protein.	0.932
B8BTK3_THAPS	EAR1	B8BTK3	B8BXA1	Uncharacterized protein.	Enoyl-reductase [NADH].	0.923
B8BTK3_THAPS	KAS2	B8BTK3	B8C5X7	Uncharacterized protein.	Probable beta-ketoacyl-acyl carrier protein synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.945
B8BTK3_THAPS	KAS3	B8BTK3	B8CGL6	Uncharacterized protein.	3-oxoacyl-synthase.	0.920
B8BTK3_THAPS	MCT1	B8BTK3	B8C2A9	Uncharacterized protein.	Malonyl coa-acyl carrier protein transacylase.	0.967
B8BUL7_THAPS	ACC	B8BUL7	B5YMF5	Uncharacterized protein.	Acetyl-coa carboxylase.	0.923
B8BUL7_THAPS	B8BVD1_THAPS	B8BUL7	B8BVD1	Uncharacterized protein.	Uncharacterized protein.	0.922
B8BUL7_THAPS	MCT1	B8BUL7	B8C2A9	Uncharacterized protein.	Malonyl coa-acyl carrier protein transacylase.	0.837
B8BVD1_THAPS	ACC	B8BVD1	B5YMF5	Uncharacterized protein.	Acetyl-coa carboxylase.	0.909
B8BVD1_THAPS	B8BUL7_THAPS	B8BVD1	B8BUL7	Uncharacterized protein.	Uncharacterized protein.	0.922
B8BVD1_THAPS	B8C1R1_THAPS	B8BVD1	B8C1R1	Uncharacterized protein.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.472
B8BVD1_THAPS	KAS2	B8BVD1	B8C5X7	Uncharacterized protein.	Probable beta-ketoacyl-acyl carrier protein synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.436