16 items (Thalassiosira pseudonana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B8BUL4_THAPS	ATP_bind_3 domain-containing protein. (492 aa)
	B8BVZ8_THAPS	Rhodanese domain-containing protein. (388 aa)
	B8BU46_THAPS	GIDA_assoc domain-containing protein. (769 aa)
	B8BWG3_THAPS	DPH-type MB domain-containing protein. (69 aa)
	B8C470_THAPS	Rhodanese domain-containing protein. (381 aa)
	IKI3	IKI3,-like protein to yeast IKI3. (945 aa)
	B8C7E1_THAPS	Uncharacterized protein. (432 aa)
	B8CA75_THAPS	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (552 aa)
	B8CC20_THAPS	Hflx-type G domain-containing protein. (453 aa)
	B8CCP6_THAPS	tRNA-methyltransferase. (392 aa)
	B8CF78_THAPS	Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (472 aa)
	B8CFF9_THAPS	Uncharacterized protein. (364 aa)
	B8CG67_THAPS	Uncharacterized protein. (1097 aa)
	B8LDI7_THAPS	Predicted protein. (509 aa)
	B8BRP6_THAPS	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis. (465 aa)
	B8BTK0_THAPS	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis. (460 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BRP6_THAPS	B8BU46_THAPS	B8BRP6	B8BU46	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.	GIDA_assoc domain-containing protein.	0.726
B8BTK0_THAPS	B8BU46_THAPS	B8BTK0	B8BU46	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.	GIDA_assoc domain-containing protein.	0.722
B8BU46_THAPS	B8BRP6_THAPS	B8BU46	B8BRP6	GIDA_assoc domain-containing protein.	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.	0.726
B8BU46_THAPS	B8BTK0_THAPS	B8BU46	B8BTK0	GIDA_assoc domain-containing protein.	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.	0.722
B8BU46_THAPS	B8CCP6_THAPS	B8BU46	B8CCP6	GIDA_assoc domain-containing protein.	tRNA-methyltransferase.	0.485
B8BU46_THAPS	B8CF78_THAPS	B8BU46	B8CF78	GIDA_assoc domain-containing protein.	Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.851
B8BU46_THAPS	B8CFF9_THAPS	B8BU46	B8CFF9	GIDA_assoc domain-containing protein.	Uncharacterized protein.	0.485
B8BU46_THAPS	B8LDI7_THAPS	B8BU46	B8LDI7	GIDA_assoc domain-containing protein.	Predicted protein.	0.485
B8BUL4_THAPS	B8BVZ8_THAPS	B8BUL4	B8BVZ8	ATP_bind_3 domain-containing protein.	Rhodanese domain-containing protein.	0.673
B8BUL4_THAPS	B8C470_THAPS	B8BUL4	B8C470	ATP_bind_3 domain-containing protein.	Rhodanese domain-containing protein.	0.673
B8BUL4_THAPS	B8C7E1_THAPS	B8BUL4	B8C7E1	ATP_bind_3 domain-containing protein.	Uncharacterized protein.	0.567
B8BUL4_THAPS	B8CA75_THAPS	B8BUL4	B8CA75	ATP_bind_3 domain-containing protein.	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.	0.717
B8BUL4_THAPS	B8CG67_THAPS	B8BUL4	B8CG67	ATP_bind_3 domain-containing protein.	Uncharacterized protein.	0.566
B8BUL4_THAPS	IKI3	B8BUL4	B8C5U0	ATP_bind_3 domain-containing protein.	IKI3,-like protein to yeast IKI3.	0.646
B8BVZ8_THAPS	B8BUL4_THAPS	B8BVZ8	B8BUL4	Rhodanese domain-containing protein.	ATP_bind_3 domain-containing protein.	0.673
B8BVZ8_THAPS	B8CA75_THAPS	B8BVZ8	B8CA75	Rhodanese domain-containing protein.	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.	0.552
B8BVZ8_THAPS	B8CG67_THAPS	B8BVZ8	B8CG67	Rhodanese domain-containing protein.	Uncharacterized protein.	0.407
B8BVZ8_THAPS	IKI3	B8BVZ8	B8C5U0	Rhodanese domain-containing protein.	IKI3,-like protein to yeast IKI3.	0.566
B8BWG3_THAPS	B8C7E1_THAPS	B8BWG3	B8C7E1	DPH-type MB domain-containing protein.	Uncharacterized protein.	0.532
B8BWG3_THAPS	B8CA75_THAPS	B8BWG3	B8CA75	DPH-type MB domain-containing protein.	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.	0.822