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RS11 RS11 rps3 rps3 rps5 rps5 secY secY rps13 rps13 rps11 rps11 rps9 rps9 rps12 rps12 rps7 rps7 rps10 rps10 B8BQ72_THAPS B8BQ72_THAPS B8BQR2_THAPS B8BQR2_THAPS RS30 RS30 B8BRE6_THAPS B8BRE6_THAPS RS18 RS18 RT5 RT5 RT16 RT16 RS7 RS7 B8BUX3_THAPS B8BUX3_THAPS RS15B RS15B RSP1 RSP1 RS16 RS16 rps19 rps19 B8C0D4_THAPS B8C0D4_THAPS RS20 RS20 RS10 RS10 RS9 RS9 RS23 RS23 RS19 RS19 B8C4Y2_THAPS B8C4Y2_THAPS RS26 RS26 B8C6G9_THAPS B8C6G9_THAPS B8C8C5_THAPS B8C8C5_THAPS RS1 RS1 RS2 RS2 RS8 RS8 RS5 RS5 RS25 RS25 B8CDP0_THAPS B8CDP0_THAPS RS3A RS3A B8CGJ9_THAPS B8CGJ9_THAPS B8LDE2_THAPS B8LDE2_THAPS RR2 RR2 RR14 RR14 rps4 rps4 rps16 rps16 rps14 rps14 rps18 rps18 rps20 rps20 rps2 rps2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RS11RS11, ribosomal protein 11 40S small ribosomal subunit. (165 aa)
rps330S ribosomal protein S3, chloroplastic; Belongs to the universal ribosomal protein uS3 family. (214 aa)
rps530S ribosomal protein S5, chloroplastic; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (179 aa)
secYProtein translocase subunit SecY; The central subunit of the protein translocation channel SecYE. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. (418 aa)
rps1330S ribosomal protein S13, chloroplastic; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. (123 aa)
rps1130S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family. (130 aa)
rps930S ribosomal protein S9, chloroplastic. (134 aa)
rps1230S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity). (124 aa)
rps730S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. (156 aa)
rps1030S ribosomal protein S10, chloroplastic; Involved in the binding of tRNA to the ribosomes. (107 aa)
B8BQ72_THAPSGuanine nucleotide binding protein beta subunit-like protein. (326 aa)
B8BQR2_THAPSUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (124 aa)
RS3040S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (66 aa)
B8BRE6_THAPSLight-repressed protein a. (198 aa)
RS18RS18, ribosomal protein 18 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS13 family. (146 aa)
RT5RT5, ribosomal protein 5; Belongs to the universal ribosomal protein uS5 family. (133 aa)
RT16RT16, ribosomal protein 16 mitochondrial small ribosomal subunit. (88 aa)
RS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (188 aa)
B8BUX3_THAPSMRP-S28 domain-containing protein. (252 aa)
RS15BRS15B, ribosomal protein 15B 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS19 family. (147 aa)
RSP140S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (243 aa)
RS16RS16, ribosomal protein 16 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS9 family. (143 aa)
rps1930S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
B8C0D4_THAPSKH type-2 domain-containing protein. (270 aa)
RS20RS20, ribosomal protein 20 40S small ribosomal subunit. (124 aa)
RS10RS10, ribosomal protein 10 40S small ribosomal subunit. (104 aa)
RS9RS9, ribosomal protein 9; Belongs to the universal ribosomal protein uS4 family. (190 aa)
RS23RS23, ribosomal protein 23 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS12 family. (143 aa)
RS19RS19, ribosomal protein 19 40S small ribosomal subunit. (148 aa)
B8C4Y2_THAPSMethyltrans_SAM domain-containing protein. (194 aa)
RS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (94 aa)
B8C6G9_THAPSMethyltrans_SAM domain-containing protein. (376 aa)
B8C8C5_THAPSMethyltrans_SAM domain-containing protein. (425 aa)
RS1RS1, ribosomal protein 1. (287 aa)
RS2RS2, ribosomal protein 2; Belongs to the universal ribosomal protein uS5 family. (262 aa)
RS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (200 aa)
RS5RS5, ribosomal protein 5; Belongs to the universal ribosomal protein uS7 family. (218 aa)
RS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (112 aa)
B8CDP0_THAPS40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (115 aa)
RS3A40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (259 aa)
B8CGJ9_THAPSUncharacterized protein. (67 aa)
B8LDE2_THAPSPredicted protein. (741 aa)
RR2RR2, ribosomal protein 2. (227 aa)
RR14annotation not available (100 aa)
rps430S ribosomal protein S4, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. Belongs to the universal ribosomal protein uS4 family. (205 aa)
rps1630S ribosomal protein S16, chloroplastic. (79 aa)
rps1430S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. (100 aa)
rps1830S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. (72 aa)
rps2030S ribosomal protein S20, chloroplastic; Binds directly to 16S ribosomal RNA; Belongs to the bacterial ribosomal protein bS20 family. (93 aa)
rps230S ribosomal protein S2, chloroplastic. (227 aa)
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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