STRINGSTRING
B8LEX2_THAPS B8LEX2_THAPS atpB atpB atpE atpE rpl21 rpl21 rpl27 rpl27 rps19 rps19 rpl16 rpl16 rpl14 rpl14 rps11 rps11 rpl13 rpl13 rps9 rps9 THAPS_6810 THAPS_6810 HCD1 HCD1 THAPS_35642 THAPS_35642 RK28 RK28 THAPS_19298 THAPS_19298 B8BQR2_THAPS B8BQR2_THAPS B8BS69_THAPS B8BS69_THAPS B8BTA3_THAPS B8BTA3_THAPS RT5 RT5 B8BUF1_THAPS B8BUF1_THAPS B8BUN5_THAPS B8BUN5_THAPS B8BUT0_THAPS B8BUT0_THAPS B8BUX3_THAPS B8BUX3_THAPS rpoT rpoT B8BVG6_THAPS B8BVG6_THAPS B8BWT6_THAPS B8BWT6_THAPS risp1 risp1 B8BX67_THAPS B8BX67_THAPS B8BZM1_THAPS B8BZM1_THAPS B8C0K7_THAPS B8C0K7_THAPS B8C0W4_THAPS B8C0W4_THAPS B8C1J4_THAPS B8C1J4_THAPS B8C1R6_THAPS B8C1R6_THAPS B8C2S0_THAPS B8C2S0_THAPS B8C3Q8_THAPS B8C3Q8_THAPS B8C3S0_THAPS B8C3S0_THAPS B8C4C1_THAPS B8C4C1_THAPS B8C4C5_THAPS B8C4C5_THAPS B8C4H8_THAPS B8C4H8_THAPS B8C4N9_THAPS B8C4N9_THAPS B8C5Z0_THAPS B8C5Z0_THAPS B8C6B3_THAPS B8C6B3_THAPS B8C704_THAPS B8C704_THAPS B8C8S2_THAPS B8C8S2_THAPS B8CBG7_THAPS B8CBG7_THAPS B8CBP1_THAPS B8CBP1_THAPS RM24 RM24 B8CCD5_THAPS B8CCD5_THAPS B8CCG5_THAPS B8CCG5_THAPS B8CCT7_THAPS B8CCT7_THAPS B8CDS8_THAPS B8CDS8_THAPS B8CE32_THAPS B8CE32_THAPS THAPSDRAFT_795 THAPSDRAFT_795 B8CEA7_THAPS B8CEA7_THAPS B8CFA2_THAPS B8CFA2_THAPS B8CFQ4_THAPS B8CFQ4_THAPS LASPO LASPO B8LC69_THAPS B8LC69_THAPS PETC2 PETC2 B8LD94_THAPS B8LD94_THAPS B8LDE7_THAPS B8LDE7_THAPS B8LDW8_THAPS B8LDW8_THAPS B8LDZ0_THAPS B8LDZ0_THAPS rpl19 rpl19 rpl11 rpl11 rps2 rps2 rps18 rps18
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B8LEX2_THAPSTim17-like protein. (140 aa)
atpBATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (474 aa)
atpEATP synthase epsilon chain, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. (133 aa)
rpl2150S ribosomal protein L21, chloroplastic; This protein binds to 23S rRNA. (105 aa)
rpl2750S ribosomal protein L27, chloroplastic. (84 aa)
rps1930S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rpl1650S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. (137 aa)
rpl1450S ribosomal protein L14, chloroplastic; Binds to 23S rRNA. (121 aa)
rps1130S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family. (130 aa)
rpl1350S ribosomal protein L13, chloroplastic; Belongs to the universal ribosomal protein uL13 family. (136 aa)
rps930S ribosomal protein S9, chloroplastic. (134 aa)
THAPS_6810Predicted protein. (162 aa)
HCD13-hydroxyacyl-CoA dehydrogenase type II; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)
THAPS_35642Predicted protein. (61 aa)
RK28RK28, ribosomal protein 28, 50S large ribosomal subunit, chloroplast. (77 aa)
THAPS_19298F-type H-ATPase delta subunit. (137 aa)
B8BQR2_THAPSUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (124 aa)
B8BS69_THAPSProhibitin. (258 aa)
B8BTA3_THAPSAlpha-keto acid dehydrogenase. (323 aa)
RT5RT5, ribosomal protein 5; Belongs to the universal ribosomal protein uS5 family. (133 aa)
B8BUF1_THAPSUncharacterized protein. (504 aa)
B8BUN5_THAPSUncharacterized protein. (486 aa)
B8BUT0_THAPSTransket_pyr domain-containing protein. (814 aa)
B8BUX3_THAPSMRP-S28 domain-containing protein. (252 aa)
rpoTDNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1217 aa)
B8BVG6_THAPSCytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (212 aa)
B8BWT6_THAPSNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (244 aa)
risp1Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (168 aa)
B8BX67_THAPSUncharacterized protein. (140 aa)
B8BZM1_THAPSGrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (178 aa)
B8C0K7_THAPSMitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (116 aa)
B8C0W4_THAPSATP synthase. (367 aa)
B8C1J4_THAPSUncharacterized protein. (296 aa)
B8C1R6_THAPSUncharacterized protein. (282 aa)
B8C2S0_THAPSBac_surface_Ag domain-containing protein. (672 aa)
B8C3Q8_THAPSRF_PROK_I domain-containing protein. (132 aa)
B8C3S0_THAPSDnaj-like protein. (95 aa)
B8C4C1_THAPSProbable mitochondrial processing peptidase; Belongs to the peptidase M16 family. (481 aa)
B8C4C5_THAPSUncharacterized protein. (278 aa)
B8C4H8_THAPSUncharacterized protein; Belongs to the GrpE family. (253 aa)
B8C4N9_THAPSUncharacterized protein. (137 aa)
B8C5Z0_THAPSUncharacterized protein. (87 aa)
B8C6B3_THAPSUncharacterized protein. (365 aa)
B8C704_THAPSNADH dehydrogenase. (261 aa)
B8C8S2_THAPSUncharacterized protein. (108 aa)
B8CBG7_THAPSNADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (499 aa)
B8CBP1_THAPSUbiquinol cytochrome c reductase. (78 aa)
RM24RM24, ribosomal protein 24 mitochondrial large ribosomal subunit. (70 aa)
B8CCD5_THAPSTom40-like protein. (285 aa)
B8CCG5_THAPSUncharacterized protein. (191 aa)
B8CCT7_THAPSSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (637 aa)
B8CDS8_THAPSNadh-ubiquinone oxidoreductase. (319 aa)
B8CE32_THAPSDAO domain-containing protein. (431 aa)
THAPSDRAFT_7952-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). (337 aa)
B8CEA7_THAPSTim10-like protein. (66 aa)
B8CFA2_THAPSTim23-like protein. (107 aa)
B8CFQ4_THAPSPeptidase_S24 domain-containing protein. (242 aa)
LASPOL-aspartate oxidase. (570 aa)
B8LC69_THAPSPredicted protein. (149 aa)
PETC2Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (181 aa)
B8LD94_THAPSPredicted protein. (105 aa)
B8LDE7_THAPSPredicted protein. (72 aa)
B8LDW8_THAPSCytochrome c1. (277 aa)
B8LDZ0_THAPSPredicted protein. (133 aa)
rpl1950S ribosomal protein L19, chloroplastic. (120 aa)
rpl1150S ribosomal protein L11, chloroplastic; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa)
rps230S ribosomal protein S2, chloroplastic. (227 aa)
rps1830S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. (72 aa)
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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