(21 nodes) Respiratory chain complex network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDH1	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (240 aa)
	B8C4C5_THAPS	Uncharacterized protein. (278 aa)
	B8C5Z0_THAPS	Uncharacterized protein. (87 aa)
	B8CBP1_THAPS	Ubiquinol cytochrome c reductase. (78 aa)
	B8CCG5_THAPS	Uncharacterized protein. (191 aa)
	B8CCT7_THAPS	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (637 aa)
	B8CDS8_THAPS	Nadh-ubiquinone oxidoreductase. (319 aa)
	B8CE32_THAPS	DAO domain-containing protein. (431 aa)
	LASPO	L-aspartate oxidase. (570 aa)
	B8LC69_THAPS	Predicted protein. (149 aa)
	PETC2	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (181 aa)
	B8LD94_THAPS	Predicted protein. (105 aa)
	B8LDE7_THAPS	Predicted protein. (72 aa)
	B8C704_THAPS	NADH dehydrogenase. (261 aa)
	B8LDW8_THAPS	Cytochrome c1. (277 aa)
	B8CBG7_THAPS	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (499 aa)
	THAPS_35642	Predicted protein. (61 aa)
	B8BSI6_THAPS	Uncharacterized protein. (72 aa)
	B8BVG6_THAPS	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (212 aa)
	B8BWT6_THAPS	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (244 aa)
	risp1	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (168 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BSI6_THAPS	B8BVG6_THAPS	B8BSI6	B8BVG6	Uncharacterized protein.	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	0.844
B8BSI6_THAPS	B8BWT6_THAPS	B8BSI6	B8BWT6	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.930
B8BSI6_THAPS	B8C4C5_THAPS	B8BSI6	B8C4C5	Uncharacterized protein.	Uncharacterized protein.	0.923
B8BSI6_THAPS	B8C5Z0_THAPS	B8BSI6	B8C5Z0	Uncharacterized protein.	Uncharacterized protein.	0.958
B8BSI6_THAPS	B8C704_THAPS	B8BSI6	B8C704	Uncharacterized protein.	NADH dehydrogenase.	0.915
B8BSI6_THAPS	B8CBG7_THAPS	B8BSI6	B8CBG7	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.883
B8BSI6_THAPS	B8CBP1_THAPS	B8BSI6	B8CBP1	Uncharacterized protein.	Ubiquinol cytochrome c reductase.	0.998
B8BSI6_THAPS	B8CCG5_THAPS	B8BSI6	B8CCG5	Uncharacterized protein.	Uncharacterized protein.	0.467
B8BSI6_THAPS	B8CDS8_THAPS	B8BSI6	B8CDS8	Uncharacterized protein.	Nadh-ubiquinone oxidoreductase.	0.868
B8BSI6_THAPS	B8LC69_THAPS	B8BSI6	B8LC69	Uncharacterized protein.	Predicted protein.	0.848
B8BSI6_THAPS	B8LD94_THAPS	B8BSI6	B8LD94	Uncharacterized protein.	Predicted protein.	0.913
B8BSI6_THAPS	B8LDW8_THAPS	B8BSI6	B8LDW8	Uncharacterized protein.	Cytochrome c1.	0.997
B8BSI6_THAPS	PETC2	B8BSI6	B8LD41	Uncharacterized protein.	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	0.844
B8BSI6_THAPS	SDH1	B8BSI6	B8BYI4	Uncharacterized protein.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.598
B8BSI6_THAPS	THAPS_35642	B8BSI6	B5YNI4	Uncharacterized protein.	Predicted protein.	0.885
B8BSI6_THAPS	risp1	B8BSI6	B8BX01	Uncharacterized protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.920
B8BVG6_THAPS	B8BSI6_THAPS	B8BVG6	B8BSI6	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Uncharacterized protein.	0.844
B8BVG6_THAPS	B8BWT6_THAPS	B8BVG6	B8BWT6	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.918
B8BVG6_THAPS	B8C4C5_THAPS	B8BVG6	B8C4C5	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Uncharacterized protein.	0.915
B8BVG6_THAPS	B8C5Z0_THAPS	B8BVG6	B8C5Z0	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Uncharacterized protein.	0.852