(4 nodes) Guanylate kinase-like domain network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B8LCC1_THAPS	Guanylate kinase-like protein. (193 aa)
	B8BXT9_THAPS	Guanylate kinase-like domain-containing protein. (243 aa)
	THAPS_23507	Predicted protein. (583 aa)
	B8BUB7_THAPS	Guanylate kinase. (219 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BUB7_THAPS	B8BXT9_THAPS	B8BUB7	B8BXT9	Guanylate kinase.	Guanylate kinase-like domain-containing protein.	0.905
B8BUB7_THAPS	B8LCC1_THAPS	B8BUB7	B8LCC1	Guanylate kinase.	Guanylate kinase-like protein.	0.904
B8BXT9_THAPS	B8BUB7_THAPS	B8BXT9	B8BUB7	Guanylate kinase-like domain-containing protein.	Guanylate kinase.	0.905
B8BXT9_THAPS	B8LCC1_THAPS	B8BXT9	B8LCC1	Guanylate kinase-like domain-containing protein.	Guanylate kinase-like protein.	0.902
B8LCC1_THAPS	B8BUB7_THAPS	B8LCC1	B8BUB7	Guanylate kinase-like protein.	Guanylate kinase.	0.904
B8LCC1_THAPS	B8BXT9_THAPS	B8LCC1	B8BXT9	Guanylate kinase-like protein.	Guanylate kinase-like domain-containing protein.	0.902