STRINGSTRING
VTS1 VTS1 B8CEW1_THAPS B8CEW1_THAPS ITS1 ITS1 ITS3 ITS3 LEUS LEUS ITS2 ITS2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VTS1Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (989 aa)
B8CEW1_THAPSValine--tRNA ligase-like protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (891 aa)
ITS1Isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1056 aa)
ITS3Probable isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1103 aa)
LEUSLeucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (907 aa)
ITS2Isoleucine-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1083 aa)
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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