(5 nodes) Nucleoside diphosphate kinase-like domain superfamily network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NDK1	Nucleoside diphosphate kinase. (149 aa)
	NDK2	Nucleoside diphosphate kinase. (152 aa)
	NDK3	Nucleoside diphosphate kinase. (151 aa)
	B8BU77_THAPS	Uncharacterized protein. (336 aa)
	NDK4	Probable nuceloside diphosphate kinase. (396 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NDK1	NDK2	B8CGD4	B8C642	Nucleoside diphosphate kinase.	Nucleoside diphosphate kinase.	0.902
NDK1	NDK3	B8CGD4	B8BQJ3	Nucleoside diphosphate kinase.	Nucleoside diphosphate kinase.	0.902
NDK1	NDK4	B8CGD4	B8BYR7	Nucleoside diphosphate kinase.	Probable nuceloside diphosphate kinase.	0.900
NDK2	NDK1	B8C642	B8CGD4	Nucleoside diphosphate kinase.	Nucleoside diphosphate kinase.	0.902
NDK2	NDK3	B8C642	B8BQJ3	Nucleoside diphosphate kinase.	Nucleoside diphosphate kinase.	0.903
NDK2	NDK4	B8C642	B8BYR7	Nucleoside diphosphate kinase.	Probable nuceloside diphosphate kinase.	0.900
NDK3	NDK1	B8BQJ3	B8CGD4	Nucleoside diphosphate kinase.	Nucleoside diphosphate kinase.	0.902
NDK3	NDK2	B8BQJ3	B8C642	Nucleoside diphosphate kinase.	Nucleoside diphosphate kinase.	0.903
NDK3	NDK4	B8BQJ3	B8BYR7	Nucleoside diphosphate kinase.	Probable nuceloside diphosphate kinase.	0.900
NDK4	NDK1	B8BYR7	B8CGD4	Probable nuceloside diphosphate kinase.	Nucleoside diphosphate kinase.	0.900
NDK4	NDK2	B8BYR7	B8C642	Probable nuceloside diphosphate kinase.	Nucleoside diphosphate kinase.	0.900
NDK4	NDK3	B8BYR7	B8BQJ3	Probable nuceloside diphosphate kinase.	Nucleoside diphosphate kinase.	0.900