(77 nodes) Fatty acid metabolism network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THAPS_6781	Predicted protein. (788 aa)
	desA	Sphingolipid 10-desaturase; Fatty acid desaturase that catalyzes the introduction of the third double bond at the Delta(10) position in d18:3Delta4,8,10 triunsaturated sphingolipid long fatty acid chains. The cytochrome b5 domain probably acts as the direct electron donor to the active site of the desaturase. (515 aa)
	desB	Sphingolipid delta-8 desaturase. (493 aa)
	desI	Probable microsomal delta-6 desaturase. (484 aa)
	B8LEK8_THAPS	Peroxisomal membrane protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (324 aa)
	DES4	Microsomal delta-4 desaturase. (550 aa)
	ACD2	ACYL-COA dehydrogenase. (380 aa)
	B8LDA6_THAPS	3-hyroxyacyl CoA dehydrogenase. (350 aa)
	SAT1	Serine acetyl transferase. (183 aa)
	DES2	Probable microsomal delta-5 desaturase. (482 aa)
	B8LCH7_THAPS	Predicted protein. (230 aa)
	KCT2	3-ketoacyl-coa thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (409 aa)
	B8CGK8_THAPS	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (289 aa)
	B8CG29_THAPS	Uncharacterized protein. (1150 aa)
	B8CG16_THAPS	AMP-binding domain-containing protein. (696 aa)
	B8CFX3_THAPS	Uncharacterized protein. (214 aa)
	B8CDT7_THAPS	Succinate/fumarate mitochondrial transporter; Belongs to the mitochondrial carrier (TC 2.A.29) family. (319 aa)
	B8CDL6_THAPS	AMP-binding domain-containing protein. (567 aa)
	B8CDJ1_THAPS	Uncharacterized protein. (219 aa)
	B8CDI0_THAPS	AMP-binding domain-containing protein. (567 aa)
	B8CCN4_THAPS	SATase_N domain-containing protein. (603 aa)
	CAT1_2	Carnitine acetyl transferase; Belongs to the carnitine/choline acetyltransferase family. (641 aa)
	ACS2_1	Long-chain-fatty-acid--CoA ligase. (674 aa)
	ELO3	Elongation of fatty acids protein. (301 aa)
	AOX1_1	Acyl-coa oxidase. (685 aa)
	B8C9K2_THAPS	Zinc-dependent alcohol dehydrogenase. (317 aa)
	B8C9J4_THAPS	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (683 aa)
	B8C9G0_THAPS	Uncharacterized protein. (373 aa)
	B8C963_THAPS	Uncharacterized protein. (288 aa)
	NPS1	Probable naphthoate synthase; Belongs to the enoyl-CoA hydratase/isomerase family. (323 aa)
	B8C6Y3_THAPS	MaoC-like domain-containing protein. (143 aa)
	THAPSDRAFT_93	Elongation of fatty acids protein. (358 aa)
	B8C658_THAPS	AMP-binding domain-containing protein. (792 aa)
	B8C4K3_THAPS	FA_desaturase domain-containing protein. (442 aa)
	KCT1	3-ketoacyl-coa thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
	B8C3P5_THAPS	Uncharacterized protein. (223 aa)
	B8C2C9_THAPS	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (326 aa)
	B8C2B7_THAPS	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (248 aa)
	MCT1	Malonyl coa-acyl carrier protein transacylase. (356 aa)
	ECI1	3,2-TRANS-ENOYL-COA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (315 aa)
	B8C1R5_THAPS	FA_desaturase domain-containing protein. (509 aa)
	B8C1K5_THAPS	Predicted protein; Belongs to the fatty acid desaturase type 1 family. (338 aa)
	B8C1I6_THAPS	Ankyrin repeat-rich vertebrate like protein. (114 aa)
	B8C0F9_THAPS	Uncharacterized protein. (424 aa)
	B8C059_THAPS	Uncharacterized protein. (510 aa)
	B8BZX2_THAPS	AMP-binding domain-containing protein. (577 aa)
	B8BYV2_THAPS	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (402 aa)
	B8BYS3_THAPS	AMP-binding domain-containing protein. (580 aa)
	B8BYH8_THAPS	Uncharacterized protein. (365 aa)
	B8BYB3_THAPS	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (472 aa)
	B8BY13_THAPS	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (226 aa)
	DES1	Probable microsomal delta-5 desaturase. (476 aa)
	B8BXB0_THAPS	Uncharacterized protein. (367 aa)
	B8BWU8_THAPS	Uncharacterized protein. (219 aa)
	B8BWQ4_THAPS	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
	ACB1	Acyl-coa-binding protein. (112 aa)
	FAO1	Bifunctional fatty acid oxidation enzyme; Belongs to the enoyl-CoA hydratase/isomerase family. (774 aa)
	B8BVD1_THAPS	Uncharacterized protein. (2251 aa)
	B8BUL7_THAPS	Uncharacterized protein. (563 aa)
	B8BUI4_THAPS	APH domain-containing protein. (422 aa)
	B8BU97_THAPS	Mitochondriale tricarboxylate carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (277 aa)
	B8BU45_THAPS	Uncharacterized protein. (288 aa)
	SAT2	Serine acetyltransferase. (234 aa)
	B8BTJ6_THAPS	CS domain-containing protein. (210 aa)
	THAPSDRAFT_974	MaoC-like domain-containing protein. (410 aa)
	B8BSQ8_THAPS	Uncharacterized protein; Belongs to the fatty acid desaturase type 1 family. (389 aa)
	THAPSDRAFT_885	MINDY_DUB domain-containing protein. (511 aa)
	B8BS70_THAPS	AMP-binding domain-containing protein. (314 aa)
	ACS1	Long-chain-fatty-acid--CoA ligase. (552 aa)
	B8BQN7_THAPS	Uncharacterized protein. (339 aa)
	THAPS_269199	Predicted protein. (244 aa)
	THAPS_35459	Predicted protein. (179 aa)
	THAPS_6816	Predicted protein. (335 aa)
	FCL1	Probable long-chain-fatty-acid--CoA ligase. (658 aa)
	DES11	Microsomal delta-5 desaturase. (477 aa)
	THAPS_19479	Predicted protein. (140 aa)
	ACC	Acetyl-coa carboxylase. (2088 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACB1	AOX1_1	B8BWM6	B8CA48	Acyl-coa-binding protein.	Acyl-coa oxidase.	0.667
ACB1	B8BYB3_THAPS	B8BWM6	B8BYB3	Acyl-coa-binding protein.	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.502
ACB1	KCT1	B8BWM6	B8C459	Acyl-coa-binding protein.	3-ketoacyl-coa thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.	0.498
ACB1	KCT2	B8BWM6	B8LC01	Acyl-coa-binding protein.	3-ketoacyl-coa thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.551
ACC	ACS1	B5YMF5	B8BRF3	Acetyl-coa carboxylase.	Long-chain-fatty-acid--CoA ligase.	0.504
ACC	B8BSQ8_THAPS	B5YMF5	B8BSQ8	Acetyl-coa carboxylase.	Uncharacterized protein; Belongs to the fatty acid desaturase type 1 family.	0.501
ACC	B8BUL7_THAPS	B5YMF5	B8BUL7	Acetyl-coa carboxylase.	Uncharacterized protein.	0.923
ACC	B8BVD1_THAPS	B5YMF5	B8BVD1	Acetyl-coa carboxylase.	Uncharacterized protein.	0.909
ACC	B8C1K5_THAPS	B5YMF5	B8C1K5	Acetyl-coa carboxylase.	Predicted protein; Belongs to the fatty acid desaturase type 1 family.	0.506
ACC	KCT2	B5YMF5	B8LC01	Acetyl-coa carboxylase.	3-ketoacyl-coa thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.662
ACC	MCT1	B5YMF5	B8C2A9	Acetyl-coa carboxylase.	Malonyl coa-acyl carrier protein transacylase.	0.952
ACD2	ACS1	B8LE08	B8BRF3	ACYL-COA dehydrogenase.	Long-chain-fatty-acid--CoA ligase.	0.618
ACD2	ACS2_1	B8LE08	B8CBL9	ACYL-COA dehydrogenase.	Long-chain-fatty-acid--CoA ligase.	0.554
ACD2	AOX1_1	B8LE08	B8CA48	ACYL-COA dehydrogenase.	Acyl-coa oxidase.	0.516
ACD2	B8BUI4_THAPS	B8LE08	B8BUI4	ACYL-COA dehydrogenase.	APH domain-containing protein.	0.951
ACD2	B8C2B7_THAPS	B8LE08	B8C2B7	ACYL-COA dehydrogenase.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.623
ACD2	B8C658_THAPS	B8LE08	B8C658	ACYL-COA dehydrogenase.	AMP-binding domain-containing protein.	0.554
ACD2	B8C6Y3_THAPS	B8LE08	B8C6Y3	ACYL-COA dehydrogenase.	MaoC-like domain-containing protein.	0.489
ACD2	B8C9J4_THAPS	B8LE08	B8C9J4	ACYL-COA dehydrogenase.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.643
ACD2	B8CDI0_THAPS	B8LE08	B8CDI0	ACYL-COA dehydrogenase.	AMP-binding domain-containing protein.	0.554