(6 nodes) GHMP kinases N terminal domain network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B8BS75_THAPS	Mevalonate disphosphate decarboxylase-like protein. (346 aa)
	B8BQ47_THAPS	Uncharacterized protein. (356 aa)
	B8C5L6_THAPS	Uncharacterized protein. (358 aa)
	B8BYG3_THAPS	GHMP_kinases_N domain-containing protein. (744 aa)
	B8BU66_THAPS	Mevalonate kinase. (315 aa)
	B8CBM1_THAPS	GalKase_gal_bdg domain-containing protein. (566 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BQ47_THAPS	B8BU66_THAPS	B8BQ47	B8BU66	Uncharacterized protein.	Mevalonate kinase.	0.407
B8BS75_THAPS	B8BU66_THAPS	B8BS75	B8BU66	Mevalonate disphosphate decarboxylase-like protein.	Mevalonate kinase.	0.954
B8BS75_THAPS	B8BYG3_THAPS	B8BS75	B8BYG3	Mevalonate disphosphate decarboxylase-like protein.	GHMP_kinases_N domain-containing protein.	0.963
B8BU66_THAPS	B8BQ47_THAPS	B8BU66	B8BQ47	Mevalonate kinase.	Uncharacterized protein.	0.407
B8BU66_THAPS	B8BS75_THAPS	B8BU66	B8BS75	Mevalonate kinase.	Mevalonate disphosphate decarboxylase-like protein.	0.954
B8BU66_THAPS	B8BYG3_THAPS	B8BU66	B8BYG3	Mevalonate kinase.	GHMP_kinases_N domain-containing protein.	0.953
B8BU66_THAPS	B8C5L6_THAPS	B8BU66	B8C5L6	Mevalonate kinase.	Uncharacterized protein.	0.543
B8BU66_THAPS	B8CBM1_THAPS	B8BU66	B8CBM1	Mevalonate kinase.	GalKase_gal_bdg domain-containing protein.	0.407
B8BYG3_THAPS	B8BS75_THAPS	B8BYG3	B8BS75	GHMP_kinases_N domain-containing protein.	Mevalonate disphosphate decarboxylase-like protein.	0.963
B8BYG3_THAPS	B8BU66_THAPS	B8BYG3	B8BU66	GHMP_kinases_N domain-containing protein.	Mevalonate kinase.	0.953
B8C5L6_THAPS	B8BU66_THAPS	B8C5L6	B8BU66	Uncharacterized protein.	Mevalonate kinase.	0.543
B8CBM1_THAPS	B8BU66_THAPS	B8CBM1	B8BU66	GalKase_gal_bdg domain-containing protein.	Mevalonate kinase.	0.407