(4 nodes) Region found in RelA / SpoT proteins network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B8CAM5_THAPS	RelA_SpoT domain-containing protein. (439 aa)
	B8CDR8_THAPS	GTP pyrophosphokinase. (719 aa)
	B8LEV9_THAPS	GTP pyrophosphokinase. (771 aa)
	B8BW94_THAPS	GTP pyrophosphokinase-like protein. (505 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BW94_THAPS	B8CAM5_THAPS	B8BW94	B8CAM5	GTP pyrophosphokinase-like protein.	RelA_SpoT domain-containing protein.	0.592
B8BW94_THAPS	B8CDR8_THAPS	B8BW94	B8CDR8	GTP pyrophosphokinase-like protein.	GTP pyrophosphokinase.	0.527
B8BW94_THAPS	B8LEV9_THAPS	B8BW94	B8LEV9	GTP pyrophosphokinase-like protein.	GTP pyrophosphokinase.	0.527
B8CAM5_THAPS	B8BW94_THAPS	B8CAM5	B8BW94	RelA_SpoT domain-containing protein.	GTP pyrophosphokinase-like protein.	0.592
B8CAM5_THAPS	B8CDR8_THAPS	B8CAM5	B8CDR8	RelA_SpoT domain-containing protein.	GTP pyrophosphokinase.	0.588
B8CAM5_THAPS	B8LEV9_THAPS	B8CAM5	B8LEV9	RelA_SpoT domain-containing protein.	GTP pyrophosphokinase.	0.588
B8CDR8_THAPS	B8BW94_THAPS	B8CDR8	B8BW94	GTP pyrophosphokinase.	GTP pyrophosphokinase-like protein.	0.527
B8CDR8_THAPS	B8CAM5_THAPS	B8CDR8	B8CAM5	GTP pyrophosphokinase.	RelA_SpoT domain-containing protein.	0.588
B8LEV9_THAPS	B8BW94_THAPS	B8LEV9	B8BW94	GTP pyrophosphokinase.	GTP pyrophosphokinase-like protein.	0.527
B8LEV9_THAPS	B8CAM5_THAPS	B8LEV9	B8CAM5	GTP pyrophosphokinase.	RelA_SpoT domain-containing protein.	0.588