(15 nodes) Starch and sucrose metabolism network (Thalassiosira pseudonana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THAPS_263111	Phosphomannomutase-like protein; Belongs to the phosphohexose mutase family. (538 aa)
	B8BR66_THAPS	Glyco_transf_20 domain-containing protein. (830 aa)
	GLK1	Glucokinase. (286 aa)
	B8BUM3_THAPS	Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (499 aa)
	B8BUY1_THAPS	Trehalose-6-phosphate synthase. (775 aa)
	GPI3	Glucose-6-phosphate isomerase; Belongs to the GPI family. (649 aa)
	B8BYN3_THAPS	Trehalose-6-phosphate synthase. (785 aa)
	B8C0P8_THAPS	Glucose-6-phosphate isomerase; Belongs to the GPI family. (779 aa)
	PGM2	Phosphoglucomutase. (557 aa)
	B8C141_THAPS	Uncharacterized protein. (431 aa)
	B8C3P6_THAPS	Glycosyl hydrolase; Belongs to the glycosyl hydrolase 1 family. (450 aa)
	B8C6I2_THAPS	Uncharacterized protein. (461 aa)
	B8C6P8_THAPS	Fructokinase. (241 aa)
	B8C7E9_THAPS	Uncharacterized protein. (664 aa)
	B8LDS2_THAPS	CelD_N domain-containing protein. (602 aa)

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BR66_THAPS	B8BUY1_THAPS	B8BR66	B8BUY1	Glyco_transf_20 domain-containing protein.	Trehalose-6-phosphate synthase.	0.902
B8BR66_THAPS	B8BYN3_THAPS	B8BR66	B8BYN3	Glyco_transf_20 domain-containing protein.	Trehalose-6-phosphate synthase.	0.911
B8BR66_THAPS	B8C141_THAPS	B8BR66	B8C141	Glyco_transf_20 domain-containing protein.	Uncharacterized protein.	0.939
B8BR66_THAPS	B8C6I2_THAPS	B8BR66	B8C6I2	Glyco_transf_20 domain-containing protein.	Uncharacterized protein.	0.920
B8BR66_THAPS	B8C7E9_THAPS	B8BR66	B8C7E9	Glyco_transf_20 domain-containing protein.	Uncharacterized protein.	0.421
B8BR66_THAPS	PGM2	B8BR66	B8C140	Glyco_transf_20 domain-containing protein.	Phosphoglucomutase.	0.415
B8BUM3_THAPS	B8C3P6_THAPS	B8BUM3	B8C3P6	Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	Glycosyl hydrolase; Belongs to the glycosyl hydrolase 1 family.	0.906
B8BUY1_THAPS	B8BR66_THAPS	B8BUY1	B8BR66	Trehalose-6-phosphate synthase.	Glyco_transf_20 domain-containing protein.	0.902
B8BUY1_THAPS	B8BYN3_THAPS	B8BUY1	B8BYN3	Trehalose-6-phosphate synthase.	Trehalose-6-phosphate synthase.	0.909
B8BUY1_THAPS	B8C141_THAPS	B8BUY1	B8C141	Trehalose-6-phosphate synthase.	Uncharacterized protein.	0.939
B8BUY1_THAPS	B8C6I2_THAPS	B8BUY1	B8C6I2	Trehalose-6-phosphate synthase.	Uncharacterized protein.	0.920
B8BUY1_THAPS	B8C7E9_THAPS	B8BUY1	B8C7E9	Trehalose-6-phosphate synthase.	Uncharacterized protein.	0.415
B8BUY1_THAPS	PGM2	B8BUY1	B8C140	Trehalose-6-phosphate synthase.	Phosphoglucomutase.	0.416
B8BYN3_THAPS	B8BR66_THAPS	B8BYN3	B8BR66	Trehalose-6-phosphate synthase.	Glyco_transf_20 domain-containing protein.	0.911
B8BYN3_THAPS	B8BUY1_THAPS	B8BYN3	B8BUY1	Trehalose-6-phosphate synthase.	Trehalose-6-phosphate synthase.	0.909
B8BYN3_THAPS	B8C141_THAPS	B8BYN3	B8C141	Trehalose-6-phosphate synthase.	Uncharacterized protein.	0.939
B8BYN3_THAPS	B8C6I2_THAPS	B8BYN3	B8C6I2	Trehalose-6-phosphate synthase.	Uncharacterized protein.	0.920
B8BYN3_THAPS	B8C7E9_THAPS	B8BYN3	B8C7E9	Trehalose-6-phosphate synthase.	Uncharacterized protein.	0.415
B8BYN3_THAPS	PGM2	B8BYN3	B8C140	Trehalose-6-phosphate synthase.	Phosphoglucomutase.	0.416
B8C0P8_THAPS	B8C141_THAPS	B8C0P8	B8C141	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Uncharacterized protein.	0.440