(6 nodes) RNA polymerase, and Transcription termination network (Marinobacter hydrocarbonoclasticus)

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Your Input:
	rpoZ	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (70 aa)
	rpoD	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (618 aa)
	nusG	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. (177 aa)
	rpoB	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1358 aa)
	rpoC	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1404 aa)
	nusA	NusA antitermination factor; Participates in both transcription termination and antitermination. (497 aa)

Your Current Organism:

Marinobacter hydrocarbonoclasticus

NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
nusA	nusG	Maqu_3349	Maqu_0707	NusA antitermination factor; Participates in both transcription termination and antitermination.	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	0.986
nusA	rpoB	Maqu_3349	Maqu_0712	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
nusA	rpoC	Maqu_3349	Maqu_0713	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.988
nusA	rpoD	Maqu_3349	Maqu_0658	NusA antitermination factor; Participates in both transcription termination and antitermination.	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.914
nusA	rpoZ	Maqu_3349	Maqu_0635	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.941
nusG	nusA	Maqu_0707	Maqu_3349	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.986
nusG	rpoB	Maqu_0707	Maqu_0712	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
nusG	rpoC	Maqu_0707	Maqu_0713	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.978
nusG	rpoD	Maqu_0707	Maqu_0658	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.735
nusG	rpoZ	Maqu_0707	Maqu_0635	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.852
rpoB	nusA	Maqu_0712	Maqu_3349	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.994
rpoB	nusG	Maqu_0712	Maqu_0707	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	0.994
rpoB	rpoC	Maqu_0712	Maqu_0713	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoD	Maqu_0712	Maqu_0658	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.985
rpoB	rpoZ	Maqu_0712	Maqu_0635	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.995
rpoC	nusA	Maqu_0713	Maqu_3349	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.988
rpoC	nusG	Maqu_0713	Maqu_0707	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	0.978
rpoC	rpoB	Maqu_0713	Maqu_0712	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoD	Maqu_0713	Maqu_0658	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.961
rpoC	rpoZ	Maqu_0713	Maqu_0635	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.990

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