STRINGSTRING
Acel_0540 Acel_0540 Acel_0541 Acel_0541 Acel_0542 Acel_0542 Acel_0543 Acel_0543 Acel_0675 Acel_0675 Acel_0866 Acel_0866 Acel_1379 Acel_1379 Acel_1682 Acel_1682 Acel_1772 Acel_1772 msrA msrA Acel_2140 Acel_2140 murJ murJ Acel_2143 Acel_2143 Acel_2145 Acel_2145 Acel_2146 Acel_2146 Acel_2147 Acel_2147 Acel_2148 Acel_2148 Acel_2149 Acel_2149
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Acel_0540PFAM: protein of unknown function DUF302; KEGG: lpn:lpg1011 hypothetical protein. (135 aa)
Acel_0541PFAM: OsmC family protein; KEGG: fra:Francci3_4465 OsmC-like protein. (151 aa)
Acel_0542TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ade:Adeh_1608 thioredoxin; Belongs to the thioredoxin family. (123 aa)
Acel_0543PFAM: protein of unknown function DUF156; KEGG: nfa:pnf2650 hypothetical protein. (85 aa)
Acel_0675Thioredoxin domain protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; KEGG: fra:Francci3_3683 thioredoxin-related. (297 aa)
Acel_0866PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fra:Francci3_0530 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (350 aa)
Acel_1379KEGG: sco:SCO6061 putative oxidoreductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family. (133 aa)
Acel_1682Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: fra:Francci3_0912 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. (158 aa)
Acel_1772TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO5187 glutaredoxin-like protein. (89 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (212 aa)
Acel_2140Hypothetical protein. (257 aa)
murJIntegral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (559 aa)
Acel_2143Hypothetical protein. (142 aa)
Acel_2145KEGG: sco:SCO3893 hypothetical protein. (473 aa)
Acel_2146RNA polymerase, sigma subunit, ECF family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO3892 putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (203 aa)
Acel_2147KEGG: tfu:Tfu_3107 hypothetical protein. (282 aa)
Acel_2148TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fra:Francci3_4536 thioredoxin reductase. (327 aa)
Acel_2149TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: fra:Francci3_4537 thioredoxin; Belongs to the thioredoxin family. (108 aa)
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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